RNA–Protein interactions for RNA: ENST00000545388.2

IST1-222, Transcript of IST1, ESCRT-III associated factor, human

TSL 2

Gene IST1, Length 630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IST1-222	ENST00000545388	MMP8	P22894	467 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	STAT1	P42224	750 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	NSF	P46459	744 aa	Known RBP	11.28	□□□□□ -0.6
IST1-222	ENST00000545388	E2F1	Q01094	437 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	CCDC173	Q0VFZ6	552 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	PDE1C	Q14123	709 aa	Predicted RBP	11.28	□□□□□ -0.6
IST1-222	ENST00000545388	POLD3	Q15054	466 aa	Predicted RBP	11.28	□□□□□ -0.6
IST1-222	ENST00000545388	SYCP1	Q15431	976 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	TMEM259	Q4ZIN3	620 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	ARTN	Q5T4W7	220 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	11.28	□□□□□ -0.6
IST1-222	ENST00000545388	KIAA1161	Q6NSJ0	714 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	BNIPL	Q7Z465	357 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	ABI3BP	Q7Z7G0	1075 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	TTC7B	Q86TV6	843 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	ARHGEF2	Q92974	986 aa	Known RBP	11.28	□□□□□ -0.6
IST1-222	ENST00000545388	TBC1D31	Q96DN5	1066 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	NAF1	Q96HR8	494 aa	Known RBP	11.28	□□□□□ -0.6
IST1-222	ENST00000545388	APOLD1	Q96LR9	279 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	BBC3	Q96PG8	261 aa	Predicted RBP	11.28	□□□□□ -0.6
IST1-222	ENST00000545388	PCDHB18P	Q96TA0	734 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	SELENOO	Q9BVL4	669 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	NRSN2	Q9GZP1	204 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	ABCG4	Q9H172	646 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	FANCL	Q9NW38	375 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	ADAM22	Q9P0K1	906 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	PCDHB1	Q9Y5F3	818 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	HS3ST3A1	Q9Y663	406 aa		11.28	□□□□□ -0.6
IST1-222	ENST00000545388	CPED1	A4D0V7	1026 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	FPGT	O14772	594 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	CREB3	O43889	395 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	CD160	O95971	181 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	KRT3	P12035	628 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	RHOQ	P17081	205 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	GPD1	P21695	349 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	RFC1	P35251	1148 aa	Predicted RBP	11.27	□□□□□ -0.61
IST1-222	ENST00000545388	ETFB	P38117	255 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	ABL2	P42684	1182 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	MAPKAPK2	P49137	400 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
IST1-222	ENST00000545388	SNRPD1	P62314	119 aa	Known RBP	11.27	□□□□□ -0.61
IST1-222	ENST00000545388	FZD2	Q14332	565 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	DEFB133	Q30KQ1	61 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	WDR59	Q6PJI9	974 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	ARC	Q7LC44	396 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	VPS36	Q86VN1	386 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	NLRP14	Q86W24	1093 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	PYROXD2	Q8N2H3	581 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	NEK11	Q8NG66	645 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	ENOX1	Q8TC92	643 aa	Known RBP	11.27	□□□□□ -0.61
IST1-222	ENST00000545388	LMX1A	Q8TE12	382 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	KLHL32	Q96NJ5	620 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	NLGN3	Q9NZ94	848 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388	RAI2	Q9Y5P3	530 aa		11.27	□□□□□ -0.61
IST1-222	ENST00000545388		H3BM21	787 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388		K7ESM1	405 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	SCAMP1	O15126	338 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	TSPAN6	O43657	245 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	OPA1	O60313	960 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	MMP20	O60882	483 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	MPO	P05164	745 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	GIMD1	P0DJR0	217 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	CKMT1A	P12532	417 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	JUND	P17535	347 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	ITIH2	P19823	946 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	CDK11B	P21127	795 aa	Known RBP	11.26	□□□□□ -0.61
IST1-222	ENST00000545388	EPHB2	P29323	1055 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	ACTN2	P35609	894 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	PTPN9	P43378	593 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	RABIF	P47224	123 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	COPB1	P53618	953 aa	Known RBP	11.26	□□□□□ -0.61
IST1-222	ENST00000545388	HDAC4	P56524	1084 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	JAM2	P57087	298 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	GEMIN4	P57678	1058 aa	Known RBP	11.26	□□□□□ -0.61
IST1-222	ENST00000545388	UBXN1	Q04323	297 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	C1orf61	Q13536	156 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	RTP5	Q14D33	572 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	TCEA2	Q15560	299 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	CDKN3	Q16667	212 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	MYLK3	Q32MK0	819 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	ZNF805	Q5CZA5	627 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.26	□□□□□ -0.61
IST1-222	ENST00000545388	TPRG1L	Q5T0D9	272 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	MANEAL	Q5VSG8	457 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	CDKAL1	Q5VV42	579 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	CRTC1	Q6UUV9	634 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	KYAT3	Q6YP21	454 aa	Known RBP	11.26	□□□□□ -0.61
IST1-222	ENST00000545388	TRIM72	Q6ZMU5	477 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	STRADA	Q7RTN6	431 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	SLFN11	Q7Z7L1	901 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	PARG	Q86W56	976 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	DCP2	Q8IU60	420 aa	Known RBP	11.26	□□□□□ -0.61
IST1-222	ENST00000545388	DCBLD1	Q8N8Z6	715 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.26	□□□□□ -0.61
IST1-222	ENST00000545388	ANKRD20A12P	Q8NF67	263 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	OR2AP1	Q8NGE2	309 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	MAPK15	Q8TD08	544 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	BAP1	Q92560	729 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	FGF11	Q92914	225 aa		11.26	□□□□□ -0.61
IST1-222	ENST00000545388	EXOC2	Q96KP1	924 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms