RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 SHROOM3Q8TF72 1996 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 NCOR2Q9Y618 2525 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 A0A0D9SEW6 157 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 MED19A0JLT2 244 aaPredicted RBP10.79□□□□□ -0.68
ATL3-204ENST00000540699 K7ESF4 209 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 ATP8B1O43520 1251 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 ZMPSTE24O75844 475 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 ATP5BP06576 529 aaKnown RBP10.79□□□□□ -0.68
ATL3-204ENST00000540699 SRPRAP08240 638 aaKnown RBP10.79□□□□□ -0.68
ATL3-204ENST00000540699 POLR2EP19388 210 aaKnown RBP10.79□□□□□ -0.68
ATL3-204ENST00000540699 ITIH2P19823 946 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 RBL1P28749 1068 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 NTSR1P30989 418 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 SERPINB6P35237 376 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 RPL22P35268 128 aaKnown RBP10.79□□□□□ -0.68
ATL3-204ENST00000540699 TIE1P35590 1138 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 HSPA9P38646 679 aaKnown RBP10.79□□□□□ -0.68
ATL3-204ENST00000540699 YBEYP58557 167 aaPredicted RBP10.79□□□□□ -0.68
ATL3-204ENST00000540699 SATB1Q01826 763 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 GNA12Q03113 381 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 SULT2A1Q06520 285 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 GALNT2Q10471 571 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 HLTFQ14527 1009 aaKnown RBP eCLIP10.79□□□□□ -0.68
ATL3-204ENST00000540699 ZNF234Q14588 700 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 PDK1Q15118 436 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 ZNF528Q3MIS6 628 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 EOGTQ5NDL2 527 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 RNF219Q5W0B1 726 aaPredicted RBP10.79□□□□□ -0.68
ATL3-204ENST00000540699 AFMIDQ63HM1 303 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 HIBCHQ6NVY1 386 aaPredicted RBP10.79□□□□□ -0.68
ATL3-204ENST00000540699 B4GALNT4Q76KP1 1039 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 ARHGAP12Q8IWW6 846 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 KIAA2013Q8IYS2 634 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 UMODL1-AS1Q8N2C9 162 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 FAM71DQ8N9W8 422 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 DCAF4L2Q8NA75 395 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 SUMF1Q8NBK3 374 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 BBOF1Q8ND07 529 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 SORCS1Q8WY21 1168 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 NELL1Q92832 810 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 ACOX2Q99424 681 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 ACE2Q9BYF1 805 aaPredicted RBP10.79□□□□□ -0.68
ATL3-204ENST00000540699 CIPCQ9C0C6 399 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 MAGEH1Q9H213 219 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 TMEM245Q9H330 911 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 SPATA6Q9NWH7 488 aaPredicted RBP10.79□□□□□ -0.68
ATL3-204ENST00000540699 DONSONQ9NYP3 566 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 STON1Q9Y6Q2 735 aa10.79□□□□□ -0.68
ATL3-204ENST00000540699 A0A1W2PQF6 199 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 KCNN4O15554 427 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 LAMTOR5O43504 91 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 KLF8O95600 359 aaPredicted RBP10.78□□□□□ -0.68
ATL3-204ENST00000540699 IFNB1P01574 187 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 ETFBP38117 255 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 ADCY8P40145 1251 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 IL12RB1P42701 662 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 CXCL12P48061 93 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 VPS41P49754 854 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 NDST2P52849 883 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 ITGA8P53708 1063 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 NRLP54845 237 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 PLTPP55058 493 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 ECT2LQ008S8 904 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 CAV1Q03135 178 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 PPIDQ08752 370 aaKnown RBP10.78□□□□□ -0.68
ATL3-204ENST00000540699 GPS1Q13098 491 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 CASP8Q14790 479 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 CRY1Q16526 586 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 P3H1Q32P28 736 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 RNASEH2BQ5TBB1 312 aaKnown RBP10.78□□□□□ -0.68
ATL3-204ENST00000540699 IZUMO3Q5VZ72 239 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 TMEM92Q6UXU6 159 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 CHPFQ8IZ52 775 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 CCDC33Q8N5R6 958 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 LZTR1Q8N653 840 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 TXNDC5Q8NBS9 432 aaKnown RBP10.78□□□□□ -0.68
ATL3-204ENST00000540699 NETO2Q8NC67 525 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 TSEN2Q8NCE0 465 aaKnown RBP10.78□□□□□ -0.68
ATL3-204ENST00000540699 CYB5D2Q8WUJ1 264 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 LRRN4Q8WUT4 740 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 TFB1MQ8WVM0 346 aaKnown RBP10.78□□□□□ -0.68
ATL3-204ENST00000540699 ARHGEF2Q92974 986 aaKnown RBP10.78□□□□□ -0.68
ATL3-204ENST00000540699 HDAC11Q96DB2 347 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 FMO2Q99518 471 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 LGMNQ99538 433 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 BRD8Q9H0E9 1235 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 VPS28Q9UK41 221 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 PLA2G4CQ9UP65 541 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 ERVW-1Q9UQF0 538 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 HS3ST2Q9Y278 367 aa10.78□□□□□ -0.68
ATL3-204ENST00000540699 FARP1Q9Y4F1 1045 aaPredicted RBP10.78□□□□□ -0.68
ATL3-204ENST00000540699 CCDC163A0A0D9SF12 145 aa10.77□□□□□ -0.69
ATL3-204ENST00000540699 C5orf60A6NFR6 353 aa10.77□□□□□ -0.69
ATL3-204ENST00000540699 PPP1R12AO14974 1030 aaPredicted RBP10.77□□□□□ -0.69
ATL3-204ENST00000540699 RAMP2O60895 175 aa10.77□□□□□ -0.69
ATL3-204ENST00000540699 PPFIA2O75334 1257 aa10.77□□□□□ -0.69
ATL3-204ENST00000540699 GCATO75600 419 aa10.77□□□□□ -0.69
ATL3-204ENST00000540699 ZNF189O75820 626 aaPredicted RBP10.77□□□□□ -0.69
ATL3-204ENST00000540699 MX2P20592 715 aa10.77□□□□□ -0.69
ATL3-204ENST00000540699 PRKCHP24723 683 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms