RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 RECQLP46063 649 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 SERPINB10P48595 397 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 PDK3Q15120 406 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 FNBP1LQ5T0N5 605 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 STRADAQ7RTN6 431 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 DHDDSQ86SQ9 333 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 PYROXD2Q8N2H3 581 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 C3orf58Q8NDZ4 430 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 SEPT5Q99719 369 aaPredicted RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 TRIM54Q9BYV2 358 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 RHOBTB2Q9BYZ6 727 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 UBE2OQ9C0C9 1292 aaKnown RBP10.11□□□□□ -0.79
TRAF1-202ENST00000540010 PRDM12Q9H4Q4 367 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 WDR41Q9HAD4 459 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 HPS4Q9NQG7 708 aa10.11□□□□□ -0.79
TRAF1-202ENST00000540010 TADA2AO75478 443 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 PGAM1P18669 254 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 CHRNB3Q05901 458 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 DDX39BQ13838 428 aaKnown RBP10.1□□□□□ -0.79
TRAF1-202ENST00000540010 MGAT5BQ3V5L5 792 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 CCDC153Q494R4 210 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 DNAJC14Q6Y2X3 702 aaPredicted RBP10.1□□□□□ -0.79
TRAF1-202ENST00000540010 P3H2Q8IVL5 708 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 CPT1BQ92523 772 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 ZNF512Q96ME7 567 aaPredicted RBP10.1□□□□□ -0.79
TRAF1-202ENST00000540010 ADAM7Q9H2U9 754 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 WDR55Q9H6Y2 383 aaPredicted RBP10.1□□□□□ -0.79
TRAF1-202ENST00000540010 COG4Q9H9E3 785 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 SLC13A4Q9UKG4 626 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 CROTQ9UKG9 612 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 RNF112Q9ULX5 631 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 AK5Q9Y6K8 562 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 ZNF236Q9UL36 1845 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 TRIP11Q15643 1979 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 ANK1P16157 1881 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 SLCO1B7G3V0H7 640 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 CHADO15335 359 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 LTFP02788 710 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 CCR1P32246 355 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 NEK2P51955 445 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 GBE1Q04446 702 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 CDH17Q12864 832 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 UPP1Q16831 310 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 MARK2Q7KZI7 788 aaKnown RBP10.1□□□□□ -0.79
TRAF1-202ENST00000540010 AMIGO2Q86SJ2 522 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 REM2Q8IYK8 340 aaPredicted RBP10.1□□□□□ -0.79
TRAF1-202ENST00000540010 KLHDC9Q8NEP7 349 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 KCTD15Q96SI1 283 aaPredicted RBP10.1□□□□□ -0.79
TRAF1-202ENST00000540010 CREBZFQ9NS37 354 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 CRYL1Q9Y2S2 319 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 PTCH2Q9Y6C5 1203 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 TRPM7Q96QT4 1865 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 PTGES3LE9PB15 166 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 BUD23O43709 281 aaKnown RBP10.1□□□□□ -0.79
TRAF1-202ENST00000540010 SCNN1AP37088 669 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 GEMP55040 296 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 MAPRE1Q15691 268 aaKnown RBP10.1□□□□□ -0.79
TRAF1-202ENST00000540010 TRIM60Q495X7 471 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 GRTP1Q5TC63 336 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 VWA5B1Q5TIE3 1220 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 MRNIPQ6NTE8 343 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 RFWD3Q6PCD5 774 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 BNIPLQ7Z465 357 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 DHFR2Q86XF0 187 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 HPS6Q86YV9 775 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 C10orf107Q8IVU9 208 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 LRRC39Q96DD0 335 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 ZNF317Q96PQ6 595 aaPredicted RBP10.1□□□□□ -0.79
TRAF1-202ENST00000540010 CSPG4P5Q96PW8 444 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 EBNA1BP2Q99848 306 aaKnown RBP10.1□□□□□ -0.79
TRAF1-202ENST00000540010 TRIM62Q9BVG3 475 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 MRGBPQ9NV56 204 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 WASF2Q9Y6W5 498 aa10.1□□□□□ -0.79
TRAF1-202ENST00000540010 CAPN8A6NHC0 703 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 STX7O15400 261 aaKnown RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 ZNF623O75123 536 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 GABBR2O75899 941 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CKBP12277 381 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 COX4I1P13073 169 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 FASP25445 335 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 L1CAMP32004 1257 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CD151P48509 253 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 PEX6Q13608 980 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 C10orf120Q5SQS8 335 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 SYPL2Q5VXT5 272 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 NET1Q7Z628 596 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 TAGAPQ8N103 731 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 TMCO5AQ8N6Q1 288 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 SH3TC2Q8TF17 1288 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CERS2Q96G23 380 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 GPR63Q9BZJ6 419 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 RERGLQ9H628 205 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 CAB39LQ9H9S4 337 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 DMAP1Q9NPF5 467 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-202ENST00000540010 RIC8BQ9NVN3 520 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 TAS2R1Q9NYW7 299 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 MOXD2PA6NHM9 499 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 YJEFN3A6XGL0 299 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 AHCYL1O43865 530 aa10.09□□□□□ -0.79
TRAF1-202ENST00000540010 SOAT2O75908 522 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms