RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ARGLU1Q9NWB6 273 aaPredicted RBP14.36□□□□□ -0.11
CD4-208ENST00000538827 GOLGA6AQ9NYA3 693 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 UBP1Q9NZI7 540 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 RAB21Q9UL25 225 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 SHOC2Q9UQ13 582 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 MUC22E2RYF6 1773 aaPredicted RBP14.36□□□□□ -0.11
CD4-208ENST00000538827 KMT2EQ8IZD2 1858 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 TCRBV7S3A2A0A539 114 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 LOC730098B7Z3J9 87 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 K7ERQ8 282 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 ARNTLO00327 626 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 MUSKO15146 869 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 BNIP3LO60238 219 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 ANXA9O76027 345 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 APODP05090 189 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 CISD3P0C7P0 127 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 ECHS1P30084 290 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 CD86P42081 329 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 TNNT3P45378 269 aaPredicted RBP14.35□□□□□ -0.11
CD4-208ENST00000538827 DRG2P55039 364 aaKnown RBP14.35□□□□□ -0.11
CD4-208ENST00000538827 GEMP55040 296 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 ECT2LQ008S8 904 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 CAV1Q03135 178 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 SULT2A1Q06520 285 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 PCSK7Q16549 785 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 MAP9Q49MG5 647 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 ACCSLQ4AC99 568 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 C22orf39Q6P5X5 142 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 PPP1R21Q6ZMI0 780 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 CCNI2Q6ZMN8 369 aaPredicted RBP14.35□□□□□ -0.11
CD4-208ENST00000538827 ADIPOR2Q86V24 386 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 RYBPQ8N488 228 aaPredicted RBP14.35□□□□□ -0.11
CD4-208ENST00000538827 PDCD7Q8N8D1 485 aaKnown RBP14.35□□□□□ -0.11
CD4-208ENST00000538827 TERB1Q8NA31 727 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 TSEN2Q8NCE0 465 aaKnown RBP14.35□□□□□ -0.11
CD4-208ENST00000538827 SPATA22Q8NHS9 363 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 ART4Q93070 314 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 NXPE3Q969Y0 559 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 FCRL5Q96RD9 977 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 RBM15Q96T37 977 aaKnown RBP eCLIP14.35□□□□□ -0.11
CD4-208ENST00000538827 SEMA3CQ99985 751 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 GORASP1Q9BQQ3 440 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 SCUBE2Q9NQ36 999 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 LHX3Q9UBR4 397 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 FBXO10Q9UK96 956 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 ERVW-1Q9UQF0 538 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 ATP8A1Q9Y2Q0 1164 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 FARP1Q9Y4F1 1045 aaPredicted RBP14.35□□□□□ -0.11
CD4-208ENST00000538827 MYLKQ15746 1914 aa14.35□□□□□ -0.11
CD4-208ENST00000538827 GALR2O43603 387 aaPredicted RBP14.34□□□□□ -0.11
CD4-208ENST00000538827 PMPCBO75439 489 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 GJB3O75712 270 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 CD160O95971 181 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 MT-CYBP00156 380 aaPredicted RBP14.34□□□□□ -0.11
CD4-208ENST00000538827 MT-CO1P00395 513 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 ASLP04424 464 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 SRCP12931 536 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 TPSB2P20231 275 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 HSPA9P38646 679 aaKnown RBP14.34□□□□□ -0.11
CD4-208ENST00000538827 RGRP47804 291 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 ST8SIA6P61647 398 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 NIPAL4Q0D2K0 466 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 MESP2Q0VG99 397 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 SPARCL1Q14515 664 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 BRD3Q15059 726 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 TPSAB1Q15661 275 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 FNDC3BQ53EP0 1204 aaKnown RBP14.34□□□□□ -0.11
CD4-208ENST00000538827 ATXN7L2Q5T6C5 722 aaPredicted RBP14.34□□□□□ -0.11
CD4-208ENST00000538827 TMEM215Q68D42 235 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 KIAA0907Q7Z7F0 614 aaPredicted RBP14.34□□□□□ -0.11
CD4-208ENST00000538827 HOOK3Q86VS8 718 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 NAT8LQ8N9F0 302 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 IPMKQ8NFU5 416 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 CHFRQ96EP1 664 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 OXNAD1Q96HP4 312 aaPredicted RBP14.34□□□□□ -0.11
CD4-208ENST00000538827 PWWP2AQ96N64 755 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 PPP1R2P1Q96PQ5 205 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 MGME1Q9BQP7 344 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 MLPHQ9BV36 600 aaPredicted RBP14.34□□□□□ -0.11
CD4-208ENST00000538827 FICDQ9BVA6 458 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 FSD1LQ9BXM9 530 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 FAM129AQ9BZQ8 928 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 SLC25A51Q9H1U9 297 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 TNKS2Q9H2K2 1166 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 EIF2B3Q9NR50 452 aaKnown RBP14.34□□□□□ -0.11
CD4-208ENST00000538827 ZDHHC18Q9NUE0 388 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 SLC27A6Q9Y2P4 619 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 EPG5Q9HCE0 2579 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 GVINP1Q7Z2Y8 2422 aa14.34□□□□□ -0.11
CD4-208ENST00000538827 TBC1D3BA6NDS4 549 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 SMAD6O43541 496 aaKnown RBP14.33□□□□□ -0.12
CD4-208ENST00000538827 NARSO43776 548 aaKnown RBP14.33□□□□□ -0.12
CD4-208ENST00000538827 IGSF6O95976 241 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 ATP5BP06576 529 aaKnown RBP14.33□□□□□ -0.12
CD4-208ENST00000538827 NNMTP40261 264 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 EIF2DP41214 584 aaKnown RBP14.33□□□□□ -0.12
CD4-208ENST00000538827 SCNN1BP51168 640 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 MTM1Q13496 603 aa14.33□□□□□ -0.12
CD4-208ENST00000538827 PREPLQ4J6C6 727 aaPredicted RBP14.33□□□□□ -0.12
CD4-208ENST00000538827 INO80DQ53TQ3 878 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms