RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 BTN2A3PQ96KV6 586 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 APOBEC2Q9Y235 224 aaKnown RBP15.34■□□□□ 0.05
USP35-204ENST00000530267 CDY1Q9Y6F8 540 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.34■□□□□ 0.05
USP35-204ENST00000530267 OR6C75A6NL08 312 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 MEI4A8MW99 385 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 KIF3CO14782 793 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 ADAM12O43184 909 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 HNRNPCL1O60812 293 aaKnown RBP15.34■□□□□ 0.05
USP35-204ENST00000530267 PEX11AO75192 247 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 OR1E1P30953 314 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 ACVRL1P37023 503 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 RENBPP51606 427 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 CCL23P55773 120 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 MXRA7P84157 204 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 WLSQ5T9L3 541 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 POTEHQ6S545 545 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 KLHDC8BQ8IXV7 354 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 POU5F2Q8N7G0 328 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 ELMO2Q96JJ3 720 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 CCDC106Q9BWC9 280 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 ACE2Q9BYF1 805 aaPredicted RBP15.34■□□□□ 0.05
USP35-204ENST00000530267 TLE6Q9H808 572 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 TMEM248Q9NWD8 314 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 ACTL7AQ9Y615 435 aa15.34■□□□□ 0.05
USP35-204ENST00000530267 TLR5O60602 858 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 CHRNGP07510 517 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 NCF2P19878 526 aaPredicted RBP15.33■□□□□ 0.04
USP35-204ENST00000530267 FGFR3P22607 806 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 IDH3AP50213 366 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 POLD3Q15054 466 aaPredicted RBP15.33■□□□□ 0.04
USP35-204ENST00000530267 TRIP4Q15650 581 aaPredicted RBP15.33■□□□□ 0.04
USP35-204ENST00000530267 ZNF789Q5FWF6 425 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 RBM15BQ8NDT2 890 aaKnown RBP15.33■□□□□ 0.04
USP35-204ENST00000530267 PXYLP1Q8TE99 480 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 CLPTM1LQ96KA5 538 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 NDNQ99608 321 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 OMDQ99983 421 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 SLC25A51Q9H1U9 297 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 MIA3Q5JRA6 1907 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 FAM95CA0A1B0GW59 222 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 SERPINA6P08185 405 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 NDST2P52849 883 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 ATN1P54259 1190 aaPredicted RBP15.33■□□□□ 0.04
USP35-204ENST00000530267 NRG1Q02297 640 aaPredicted RBP15.33■□□□□ 0.04
USP35-204ENST00000530267 GPR17Q13304 367 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 TUBB3Q13509 450 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 HNRNPDQ14103 355 aaKnown RBP15.33■□□□□ 0.04
USP35-204ENST00000530267 KPNB1Q14974 876 aaKnown RBP15.33■□□□□ 0.04
USP35-204ENST00000530267 DBN1Q16643 649 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 KHDC1Q4VXA5 237 aaKnown RBP15.33■□□□□ 0.04
USP35-204ENST00000530267 NADSYN1Q6IA69 706 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 KDELC1Q6UW63 502 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 LDB1Q86U70 411 aaPredicted RBP15.33■□□□□ 0.04
USP35-204ENST00000530267 PGBD5Q8N414 524 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 SGF29Q96ES7 293 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 TSNARE1Q96NA8 513 aa15.33■□□□□ 0.04
USP35-204ENST00000530267 NOP53Q9NZM5 478 aaKnown RBP15.33■□□□□ 0.04
USP35-204ENST00000530267 WASH4PA8MWX3 477 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 BUD23O43709 281 aaKnown RBP15.32■□□□□ 0.04
USP35-204ENST00000530267 TRIM13O60858 407 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 RAMP2O60895 175 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 GALTP07902 379 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 ATF6P18850 670 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 DNAJB2P25686 324 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 PGM1P36871 562 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 CDK7P50613 346 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 CFAP157Q5JU67 520 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 CNSTQ6PJW8 725 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 PTAR1Q7Z6K3 402 aaPredicted RBP15.32■□□□□ 0.04
USP35-204ENST00000530267 DEFB128Q7Z7B8 93 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 RNF135Q8IUD6 432 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 CENPLQ8N0S6 344 aaPredicted RBP15.32■□□□□ 0.04
USP35-204ENST00000530267 FSTL5Q8N475 847 aaPredicted RBP15.32■□□□□ 0.04
USP35-204ENST00000530267 NSMCE1Q8WV22 266 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 NXNL1Q96CM4 212 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 IMP4Q96G21 291 aaKnown RBP15.32■□□□□ 0.04
USP35-204ENST00000530267 GATA5Q9BWX5 397 aaPredicted RBP15.32■□□□□ 0.04
USP35-204ENST00000530267 C1QTNF1Q9BXJ1 281 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 NACA2Q9H009 215 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.32■□□□□ 0.04
USP35-204ENST00000530267 TREX1Q9NSU2 369 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 NSMCE4AQ9NXX6 385 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 IL37Q9NZH6 218 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 UXTQ9UBK9 157 aaPredicted RBP15.32■□□□□ 0.04
USP35-204ENST00000530267 TAGLN3Q9UI15 199 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 PLXNA3P51805 1871 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 SIN3BO75182 1162 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 RTN3O95197 1032 aaPredicted RBP15.32■□□□□ 0.04
USP35-204ENST00000530267 MMP2P08253 660 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 SBK3P0C264 359 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 HARS2P49590 506 aaKnown RBP15.32■□□□□ 0.04
USP35-204ENST00000530267 SESN3P58005 492 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 BFSP2Q13515 415 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 SLC12A1Q13621 1099 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 RBM20Q5T481 1227 aaKnown RBP15.32■□□□□ 0.04
USP35-204ENST00000530267 NEPROQ6NW34 567 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 FAM126BQ8IXS8 530 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 WDR60Q8WVS4 1066 aa15.32■□□□□ 0.04
USP35-204ENST00000530267 COG4Q9H9E3 785 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms