RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 USP12O75317 370 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 H2AFYO75367 372 aaKnown RBP12.64□□□□□ -0.39
TSKU-203ENST00000527881 GABBR2O75899 941 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 PGAM1P18669 254 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 ATP6V1B2P21281 511 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 PTPN9P43378 593 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 OSTNP61366 133 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 TRIM32Q13049 653 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 INAVAQ3KP66 663 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 ATAD3BQ5T9A4 648 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 AGAP7PQ5VUJ5 663 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 IL31Q6EBC2 164 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 B3GNT9Q6UX72 402 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.64□□□□□ -0.39
TSKU-203ENST00000527881 GMCL1P1Q8NEA9 526 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 CERS2Q96G23 380 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 OMDQ99983 421 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 ZC3H12CQ9C0D7 883 aaKnown RBP12.64□□□□□ -0.39
TSKU-203ENST00000527881 TBC1D14Q9P2M4 693 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 NARFQ9UHQ1 456 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 CYTH4Q9UIA0 394 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 TCAF1Q9Y4C2 921 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 PCDHAC2Q9Y5I4 1007 aa12.64□□□□□ -0.39
TSKU-203ENST00000527881 UBDO15205 165 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 SNAP29O95721 258 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 CAPNS1P04632 268 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 BMP2P12643 396 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 CCND2P30279 289 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 SEPHS1P49903 392 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 HNRNPFP52597 415 aaKnown RBP12.63□□□□□ -0.39
TSKU-203ENST00000527881 SLC13A2Q13183 592 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 SPCS2Q15005 226 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 TAZQ16635 292 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 IMPG1Q17R60 797 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 KIF19Q2TAC6 998 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 CCNYL2Q5T2Q4 361 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 LIPMQ5VYY2 423 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 XYLT1Q86Y38 959 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 PEX5LQ8IYB4 626 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 ANKRD13AQ8IZ07 590 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 SPATA6LQ8N4H0 392 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 CERS5Q8N5B7 392 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 ZFP90Q8TF47 636 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 GLMNQ92990 594 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 AGAP2Q99490 1192 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 TCRBV3S1A0A5B6 114 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 SLCO1B7G3V0H7 640 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 MSI1O43347 362 aaKnown RBP12.63□□□□□ -0.39
TSKU-203ENST00000527881 XYLBO75191 536 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 NADKO95544 446 aaPredicted RBP12.63□□□□□ -0.39
TSKU-203ENST00000527881 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 HNRNPLP14866 589 aaKnown RBP eCLIP12.63□□□□□ -0.39
TSKU-203ENST00000527881 ADSLP30566 484 aaPredicted RBP12.63□□□□□ -0.39
TSKU-203ENST00000527881 POLR2IP36954 125 aaKnown RBP12.63□□□□□ -0.39
TSKU-203ENST00000527881 CDH8P55286 799 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 ACTR2P61160 394 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 NIPAL4Q0D2K0 466 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 PPIL2Q13356 520 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 CYP51A1Q16850 503 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 GRTP1Q5TC63 336 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 SAMD3Q8N6K7 520 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 LILRB4Q8NHJ6 448 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 PCDH19Q8TAB3 1148 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 ACER1Q8TDN7 264 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 CHURC1Q8WUH1 139 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 CPNE1Q99829 537 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 ANKEF1Q9NU02 776 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 RUVBL2Q9Y230 463 aaKnown RBP12.63□□□□□ -0.39
TSKU-203ENST00000527881 SNX5Q9Y5X3 404 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 SLC22A2O15244 555 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 DHX15O43143 795 aaKnown RBP12.63□□□□□ -0.39
TSKU-203ENST00000527881 RPS9P46781 194 aaKnown RBP12.63□□□□□ -0.39
TSKU-203ENST00000527881 TRAP1Q12931 704 aaKnown RBP12.63□□□□□ -0.39
TSKU-203ENST00000527881 SLC36A3Q495N2 470 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 USP43Q70EL4 1123 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 ITIH5Q86UX2 942 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 CPSF7Q8N684 471 aaKnown RBP12.63□□□□□ -0.39
TSKU-203ENST00000527881 COLGALT1Q8NBJ5 622 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 SLC4A11Q8NBS3 891 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 OR9I1Q8NGQ6 314 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 OR13F1Q8NGS4 319 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 SEPHS2Q99611 448 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 CNPY3Q9BT09 278 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 OXSMQ9NWU1 459 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.63□□□□□ -0.39
TSKU-203ENST00000527881 MOSPD1Q9UJG1 213 aa12.63□□□□□ -0.39
TSKU-203ENST00000527881 ILVBLA1L0T0 632 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 BCLAF3A2AJT9 711 aaKnown RBP12.62□□□□□ -0.39
TSKU-203ENST00000527881 TRPC5OSA6NMA1 111 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 PTGES3LE9PB15 166 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 IDH3BO43837 385 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 SNRPB2P08579 225 aaKnown RBP12.62□□□□□ -0.39
TSKU-203ENST00000527881 TGM2P21980 687 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 NUMBP49757 651 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 STX1BP61266 288 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 PHC1P78364 1004 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 PIGFQ07326 219 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 GALNT2Q10471 571 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms