RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ABCC13Q9NSE7 274 aa6.45□□□□□ -1.38
PABPC1-220ENST00000522658 TJP2Q9UDY2 1190 aa6.45□□□□□ -1.38
PABPC1-220ENST00000522658 FZD4Q9ULV1 537 aa6.45□□□□□ -1.38
PABPC1-220ENST00000522658 RAI2Q9Y5P3 530 aa6.45□□□□□ -1.38
PABPC1-220ENST00000522658 FASNP49327 2511 aaKnown RBP6.45□□□□□ -1.38
PABPC1-220ENST00000522658 LOC400499M0QZD8 3231 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 ANKRD11Q6UB99 2663 aaPredicted RBP6.44□□□□□ -1.38
PABPC1-220ENST00000522658 PTPRBP23467 1997 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 C1QTNF3-AMACRE9PGA6 284 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 H3BS24 57 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 PDXKO00764 312 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 XPO1O14980 1071 aaKnown RBP6.44□□□□□ -1.38
PABPC1-220ENST00000522658 MOCS2O96007 188 aaPredicted RBP6.44□□□□□ -1.38
PABPC1-220ENST00000522658 APOEP02649 317 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 KLKB1P03952 638 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 SETSIPP0DME0 302 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 PDIA4P13667 645 aaKnown RBP6.44□□□□□ -1.38
PABPC1-220ENST00000522658 LCP1P13796 627 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 ZNF18P17022 549 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 CKMT2P17540 419 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 CASP1P29466 404 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 NUDT1P36639 197 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 DLG4P78352 724 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 E2F1Q01094 437 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 CCDC15Q0P6D6 951 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 CUL4BQ13620 913 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 TBC1D25Q3MII6 688 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 SETMARQ53H47 684 aaPredicted RBP6.44□□□□□ -1.38
PABPC1-220ENST00000522658 DCAF17Q5H9S7 520 aaPredicted RBP6.44□□□□□ -1.38
PABPC1-220ENST00000522658 FAM46CQ5VWP2 391 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 KRT39Q6A163 491 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 ALG1LQ6GMV1 187 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 NAPEPLDQ6IQ20 393 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 SCD5Q86SK9 330 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 PIGZQ86VD9 579 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 MMAAQ8IVH4 418 aaKnown RBP6.44□□□□□ -1.38
PABPC1-220ENST00000522658 LSMEM2Q8N112 164 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 ANKRD52Q8NB46 1076 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 FBXL13Q8NEE6 735 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 TAS1R2Q8TE23 839 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 KCNE4Q8WWG9 221 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 FAM149B1Q96BN6 582 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 CCDC114Q96M63 670 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 TWNKQ96RR1 684 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 TRIM62Q9BVG3 475 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 KRTAP4-11Q9BYQ6 195 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 PRORYQ9H606 182 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 CLMPQ9H6B4 373 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 C12orf49Q9H741 205 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 TMEM8AQ9HCN3 771 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 DYRK4Q9NR20 520 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 THSD1Q9NS62 852 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 CISHQ9NSE2 258 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 SFMBT1Q9UHJ3 866 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 SLC25A13Q9UJS0 675 aa6.44□□□□□ -1.38
PABPC1-220ENST00000522658 DSPP15924 2871 aaKnown RBP6.44□□□□□ -1.38
PABPC1-220ENST00000522658 ACACAQ13085 2346 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 PLXNB3Q9ULL4 1909 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 TARSL2A2RTX5 802 aaKnown RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 M0QYV0 167 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 TLR4O00206 839 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 CBX4O00257 560 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 MAPK13O15264 365 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 MSI1O43347 362 aaKnown RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 TLX3O43711 291 aaPredicted RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 SLC28A2O43868 658 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 SDC3O75056 442 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 MYL1P05976 194 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 IGHV4-34P06331 123 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 GOT1P17174 413 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 C5AR1P21730 350 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 RBMS1P29558 406 aaKnown RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 MAT2AP31153 395 aaKnown RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 SLC8A1P32418 973 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 GTF2H1P32780 548 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 PSMC2P35998 433 aaKnown RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 CSKP41240 450 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 DUSP3P51452 185 aaPredicted RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 CCR5P51681 352 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 GALCP54803 685 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 ADPRHP54922 357 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 CLDN6P56747 220 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 TBX4P57082 545 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 GABREP78334 506 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 OVGP1Q12889 678 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 CUL4AQ13619 759 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 RTP5Q14D33 572 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 HNRNPA1L2Q32P51 320 aaKnown RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 ACCSLQ4AC99 568 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 PRAMEF14Q5SWL7 426 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 MPP7Q5T2T1 576 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 ARHGAP40Q5TG30 622 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 BSPRYQ5W0U4 402 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 TMEM215Q68D42 235 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 LETMD1Q6P1Q0 360 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 RFWD3Q6PCD5 774 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 HDXQ7Z353 690 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 CHSY1Q86X52 802 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 FAM217AQ8IXS0 508 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 LRRC56Q8IYG6 542 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms