RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 CLK3P49761 638 aaKnown RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 STARD6P59095 220 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 RPS7P62081 194 aaKnown RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 MRPS35P82673 323 aaKnown RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 CSTF1Q05048 431 aaKnown RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 POU5F1BQ06416 359 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 GRIK3Q13003 919 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 PSMD5Q16401 504 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 LIN9Q5TKA1 542 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 SLC27A1Q6PCB7 646 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 MAML2Q8IZL2 1156 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 Q8NA96 180 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 PJA1Q8NG27 643 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 ITFG1Q8TB96 612 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 LNX1Q8TBB1 728 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 FGF13Q92913 245 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 KAT5Q92993 513 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 CCDC43Q96MW1 224 aaKnown RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 SMAD5Q99717 465 aaKnown RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 NAP1L4Q99733 375 aaKnown RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 KXD1Q9BQD3 176 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 CLSTN3Q9BQT9 956 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 DUSP26Q9BV47 211 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 TLR10Q9BXR5 811 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 ASPSCR1Q9BZE9 553 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 POLR3FQ9H1D9 316 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 CXCL16Q9H2A7 254 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 PRDM13Q9H4Q3 707 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 PDRG1Q9NUG6 133 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 SIDT1Q9NXL6 827 aaKnown RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 FBXW11Q9UKB1 542 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 TLK1Q9UKI8 766 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 CDH7Q9ULB5 785 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 MTF2Q9Y483 593 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 ZFP37Q9Y6Q3 630 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-216ENST00000520868 C2orf16Q68DN1 1984 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 DENND4AQ7Z401 1863 aa6.36□□□□□ -1.39
PABPC1-216ENST00000520868 CACNA1IQ9P0X4 2223 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 FRYLO94915 3013 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 DMXL1Q9Y485 3027 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 CEP250Q9BV73 2442 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 SF3B1O75533 1304 aaKnown RBP eCLIP6.35□□□□□ -1.39
PABPC1-216ENST00000520868 OTOGLQ3ZCN5 2332 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 LRRIQ4A6NIV6 560 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 USO1O60763 962 aaKnown RBP6.35□□□□□ -1.39
PABPC1-216ENST00000520868 REC8O95072 547 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 SNUPNO95149 360 aaKnown RBP6.35□□□□□ -1.39
PABPC1-216ENST00000520868 C1RP00736 705 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 HNRNPA1P09651 372 aaKnown RBP eCLIP6.35□□□□□ -1.39
PABPC1-216ENST00000520868 OR1D2P34982 312 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 ZNF169Q14929 603 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-216ENST00000520868 ODF1Q14990 250 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 MLF2Q15773 248 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-216ENST00000520868 THEMIS2Q5TEJ8 643 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 GPR65Q8IYL9 337 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 FAM177A1Q8N128 213 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-216ENST00000520868 SUMF1Q8NBK3 374 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 SIMC1Q8NDZ2 872 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 ACTRT2Q8TDY3 377 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 MCRS1Q96EZ8 462 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 KLHL32Q96NJ5 620 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 DMRTA2Q96SC8 542 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 HSD17B14Q9BPX1 270 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 POLD4Q9HCU8 107 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 ANKEF1Q9NU02 776 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 INTS13Q9NVM9 706 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 HCFC1R1Q9NWW0 138 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 PTGFRNQ9P2B2 879 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 DNMT3BQ9UBC3 853 aaKnown RBP6.35□□□□□ -1.39
PABPC1-216ENST00000520868 PCDHA12Q9UN75 941 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 POLHQ9Y253 713 aa6.35□□□□□ -1.39
PABPC1-216ENST00000520868 SPTBN2O15020 2390 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 PTGESO14684 152 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 SLC16A6O15403 523 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 PEX1O43933 1283 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 ZFPL1O95159 310 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 LYPLA2O95372 231 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 THP07101 528 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 FTH1P19P0C7X4 201 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 MALP21145 153 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 FBLP22087 321 aaKnown RBP6.34□□□□□ -1.39
PABPC1-216ENST00000520868 KRT2P35908 639 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 PTH2RP49190 550 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 RARRES1P49788 294 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 ELLP55199 621 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-216ENST00000520868 CALCRLQ16602 461 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 KHDC1Q4VXA5 237 aaKnown RBP6.34□□□□□ -1.39
PABPC1-216ENST00000520868 GLRA4Q5JXX5 417 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 TSSK4Q6SA08 328 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 TPRG1Q6ZUI0 275 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 MTSS1LQ765P7 747 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 PDSS2Q86YH6 399 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 ATRIPQ8WXE1 791 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 ING5Q8WYH8 240 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 HEPHQ9BQS7 1158 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 DDX23Q9BUQ8 820 aaKnown RBP6.34□□□□□ -1.39
PABPC1-216ENST00000520868 NFKBIZQ9BYH8 718 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 PLA2G2FQ9BZM2 168 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 IMPG2Q9BZV3 1241 aa6.34□□□□□ -1.39
PABPC1-216ENST00000520868 TM6SF1Q9BZW5 370 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms