RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CD63P08962 238 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 RARGP13631 454 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 SLC2A4P14672 509 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 TNFRSF1AP19438 455 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 IL11P20809 199 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 RRM1P23921 792 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 UBA7P41226 1012 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 CLCNKBP51801 687 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 CALD1Q05682 793 aaKnown RBP5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 PROSER3Q2NL68 480 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 GPAT4Q86UL3 456 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 TICAM1Q8IUC6 712 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 PNLDC1Q8NA58 520 aaKnown RBP5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 PSPC1Q8WXF1 523 aaKnown RBP5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 GTF3C6Q969F1 213 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 PGAM5Q96HS1 289 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 CMTM3Q96MX0 182 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 GLIS2Q9BZE0 524 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 ASAH2Q9NR71 780 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 SPATS2LQ9NUQ6 558 aaKnown RBP5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 RPS6KA6Q9UK32 745 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 MKLN1Q9UL63 735 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 PCDHGB4Q9UN71 923 aa5.6□□□□□ -1.51
HMGB1P46-201ENST00000520062 SYNDIG1LA6NDD5 238 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 SMIM22K7EJ46 135 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 SCAMP1O15126 338 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 RNMTO43148 476 aaKnown RBP5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 GJB3O75712 270 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 NEURL1O76050 574 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 SEC31AO94979 1220 aaKnown RBP5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 OR2C1O95371 312 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 IPO7O95373 1038 aaKnown RBP5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 ADRB1P08588 477 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 INSRRP14616 1297 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 KRT4P19013 534 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 CDAP32320 146 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 NNMTP40261 264 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 CENPAP49450 140 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 GNAQP50148 359 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 OLIG2Q13516 323 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 VEPH1Q14D04 833 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 PGM5Q15124 567 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 PRAMEF17Q5VTA0 474 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 ISM2Q6H9L7 571 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 SLC30A6Q6NXT4 461 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 CRIP3Q6Q6R5 217 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 FAM83HQ6ZRV2 1179 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 UBE2Q1Q7Z7E8 422 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 TMC8Q8IU68 726 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 OR4N2Q8NGD1 307 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 MXD3Q9BW11 206 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 KLK15Q9H2R5 256 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 ASB6Q9NWX5 421 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 DLGAP2Q9P1A6 1054 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 ARPP21Q9UBL0 812 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 MORF4L1Q9UBU8 362 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 MTMR6Q9Y217 621 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 CARD8Q9Y2G2 431 aa5.59□□□□□ -1.51
HMGB1P46-201ENST00000520062 UTYO14607 1347 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 A0A0A0MQY5 61 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 CDRT15L2A8MXV6 281 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 BEST1O76090 585 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 TMCC1O94876 653 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 TFP02787 698 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 DNTTP04053 509 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 ADRB2P07550 413 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 KLRC2P26717 231 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 PIP4K2AP48426 406 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 CDH8P55286 799 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 HDAC4P56524 1084 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 YPEL5P62699 121 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 TUBA4AP68366 448 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 IFI35P80217 286 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 SLC18A2Q05940 514 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 SYTL3Q4VX76 610 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 RAB41Q5JT25 222 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 AAGABQ6PD74 315 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 CPLX2Q6PUV4 134 aaKnown RBP5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 CHST9Q7L1S5 443 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 CCDC25Q86WR0 208 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 C17orf53Q8N3J3 647 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 OSR1Q8TAX0 266 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 SGCDQ92629 289 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 KAT2AQ92830 837 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 MAP4K1Q92918 833 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 JAKMIP2Q96AA8 810 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 MMABQ96EY8 250 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 C1orf74Q96LT6 269 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 WDFY2Q96P53 400 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 EFHD1Q9BUP0 239 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 TXLNGYQ9BZA5 131 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 PLEKHA4Q9H4M7 779 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 POLR1BQ9H9Y6 1135 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 MOV10Q9HCE1 1003 aaKnown RBP5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 ZNF304Q9HCX3 659 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 SEMA4GQ9NTN9 838 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 BCCIPQ9P287 314 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 ABI3Q9P2A4 366 aa5.58□□□□□ -1.52
HMGB1P46-201ENST00000520062 NFKBIL1Q9UBC1 381 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms