RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 PTGDR2Q9Y5Y4 395 aa3.32□□□□□ -1.88
PABPC1-209ENST00000519100 CD109Q6YHK3 1445 aa3.32□□□□□ -1.88
PABPC1-209ENST00000519100 TCOF1Q13428 1488 aaKnown RBP3.32□□□□□ -1.88
PABPC1-209ENST00000519100 SCAF11Q99590 1463 aaKnown RBP3.32□□□□□ -1.88
PABPC1-209ENST00000519100 CUL9Q8IWT3 2517 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 CHD4Q14839 1912 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 WDR97A6NE52 1622 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 RNF17Q9BXT8 1623 aaKnown RBP3.31□□□□□ -1.88
PABPC1-209ENST00000519100 ZCCHC6Q5VYS8 1495 aaKnown RBP3.31□□□□□ -1.88
PABPC1-209ENST00000519100 EIF3FO00303 357 aaPredicted RBP3.31□□□□□ -1.88
PABPC1-209ENST00000519100 HSPB6O14558 160 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 METTL18O95568 372 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 GNLYP22749 145 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 CNTFP26441 200 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 TKTP29401 623 aaKnown RBP3.31□□□□□ -1.88
PABPC1-209ENST00000519100 GJC1P36383 396 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 MAPK9P45984 424 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 PDLIM4P50479 330 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 ACTR2P61160 394 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 ARHGAP8P85298 464 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 GPR18Q14330 331 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 RUNDC3AQ59EK9 446 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 ANKRD45Q5TZF3 282 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 DCAF12L2Q5VW00 463 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 ZNF367Q7RTV3 350 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 RBM23Q86U06 439 aaKnown RBP3.31□□□□□ -1.88
PABPC1-209ENST00000519100 CADM3Q8N126 398 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 RBMXL3Q8N7X1 1067 aaKnown RBP3.31□□□□□ -1.88
PABPC1-209ENST00000519100 OR4N2Q8NGD1 307 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 CEP70Q8NHQ1 597 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 CEP76Q8TAP6 659 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 GPT2Q8TD30 523 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 RBM17Q96I25 401 aaKnown RBP3.31□□□□□ -1.88
PABPC1-209ENST00000519100 ZSCAN31Q96LW9 406 aaPredicted RBP3.31□□□□□ -1.88
PABPC1-209ENST00000519100 ISCA1Q9BUE6 129 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 PHF7Q9BWX1 381 aaPredicted RBP3.31□□□□□ -1.88
PABPC1-209ENST00000519100 CADM1Q9BY67 442 aaKnown RBP3.31□□□□□ -1.88
PABPC1-209ENST00000519100 DCLK3Q9C098 648 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.31□□□□□ -1.88
PABPC1-209ENST00000519100 LMAN2LQ9H0V9 348 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 RIC8AQ9NPQ8 531 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 DERAQ9Y315 318 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 RAP2CQ9Y3L5 183 aa3.31□□□□□ -1.88
PABPC1-209ENST00000519100 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.3□□□□□ -1.88
PABPC1-209ENST00000519100 FAM90A7PA6NKC0 464 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 FAM90A22PA8MWA6 464 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 FAM90A12PA8MX19 464 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 FAM90A23PA8MXZ1 464 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 SLC28A2O43868 658 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 SOX30O94993 753 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 HLA-DQA2P01906 255 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 POLBP06746 335 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 CNPP09543 421 aaKnown RBP3.3□□□□□ -1.88
PABPC1-209ENST00000519100 HSD3B1P14060 373 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 CPA1P15085 419 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 ITGB8P26012 769 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 DCTDP32321 178 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 HNF1BP35680 557 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 AVPR1AP37288 418 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 MCM2P49736 904 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 CLCNKBP51801 687 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 SLC18A2Q05940 514 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 TRAF3Q13114 568 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 ME3Q16798 604 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 SLC4A8Q2Y0W8 1093 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 ADCK5Q3MIX3 580 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 ZNF585BQ52M93 769 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 CBWD5Q5RIA9 395 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 AADACL2Q6P093 401 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 GJB7Q6PEY0 223 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 LVRNQ6Q4G3 990 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 SERPINA11Q86U17 422 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 IGFN1Q86VF2 1251 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 C2CD5Q86YS7 1000 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 ANKRD18AQ8IVF6 992 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 CPOQ8IVL8 374 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 SMAP1Q8IYB5 467 aaPredicted RBP3.3□□□□□ -1.88
PABPC1-209ENST00000519100 DPP10Q8N608 796 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 BICD2Q8TD16 824 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 STAMQ92783 540 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 NEUROG1Q92886 237 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 UBXN10Q96LJ8 280 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 TEFMQ96QE5 360 aaKnown RBP3.3□□□□□ -1.88
PABPC1-209ENST00000519100 TWNKQ96RR1 684 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 RASSF1Q9NS23 344 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 RRN3Q9NYV6 651 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 GGA3Q9NZ52 723 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 GRHL1Q9NZI5 618 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 NCKIPSDQ9NZQ3 722 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 SEL1LQ9UBV2 794 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 SLC4A4Q9Y6R1 1079 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 PRDM2Q13029 1718 aa3.3□□□□□ -1.88
PABPC1-209ENST00000519100 NWD1Q149M9 1564 aa3.29□□□□□ -1.88
PABPC1-209ENST00000519100 KDM5BQ9UGL1 1544 aa3.29□□□□□ -1.88
PABPC1-209ENST00000519100 FAM135BQ49AJ0 1406 aa3.29□□□□□ -1.88
PABPC1-209ENST00000519100 TRIP12Q14669 1992 aaPredicted RBP3.29□□□□□ -1.88
PABPC1-209ENST00000519100 CNTNAP2Q9UHC6 1331 aa3.29□□□□□ -1.88
PABPC1-209ENST00000519100 CCDC189A1A4V9 331 aa3.29□□□□□ -1.88
PABPC1-209ENST00000519100 VWA3AA6NCI4 1184 aa3.29□□□□□ -1.88
PABPC1-209ENST00000519100 C4orf47A7E2U8 309 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms