RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 HECAQ9UBI9 543 aaPredicted RBP13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 FADS3Q9Y5Q0 445 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 FASNP49327 2511 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 BAHCC1Q9P281 2608 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 SPINT1O43278 529 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 CCP110O43303 1012 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 SIGLEC6O43699 453 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 AP1G1O43747 822 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 RAMP2O60895 175 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 ATP1A3P13637 1013 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 CKMT2P17540 419 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 DGKAP23743 735 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 GKP32189 559 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 HNF1BP35680 557 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 ABL2P42684 1182 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 GEMIN4P57678 1058 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 ILKQ13418 452 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 HES3Q5TGS1 186 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 PTAR1Q7Z6K3 402 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 PLPP6Q8IY26 295 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 PYROXD2Q8N2H3 581 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 ANKRD20A12PQ8NF67 263 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 OR2AP1Q8NGE2 309 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 PCMTD1Q96MG8 357 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 MCEEQ96PE7 176 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 SELENOOQ9BVL4 669 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 CALN1Q9BXU9 219 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 SLC17A9Q9BYT1 436 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 UCKL1Q9NWZ5 548 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 GGT7Q9UJ14 662 aa13.23□□□□□ -0.29
HMGCS1-205ENST00000508319 SIGLEC16A6NMB1 481 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 A6NNZ2 444 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 RAD51BO15315 384 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 PIAS2O75928 621 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 GSRP00390 522 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 GIMD1P0DJR0 217 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 HOXB3P14651 431 aaPredicted RBP13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 ACP1P24666 158 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 ZNF143P52747 638 aaPredicted RBP13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 RPL7AP62424 266 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 RPS21P63220 83 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 ZNF211Q13398 564 aaPredicted RBP13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 COL28A1Q2UY09 1125 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 PPP1R15BQ5SWA1 713 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 DNAJC24Q6P3W2 148 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 C19orf48Q6RUI8 117 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 KYAT3Q6YP21 454 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 LEKR1Q6ZMV7 388 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 RTL3Q8N8U3 475 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 OR4C6Q8NH72 309 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 RFFLQ8WZ73 363 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 BMFQ96LC9 184 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 AGPAT1Q99943 283 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 SYT11Q9BT88 431 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 SEPT11Q9NVA2 429 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 ITM2BQ9Y287 266 aa13.22□□□□□ -0.29
HMGCS1-205ENST00000508319 POM121BA6NF01 834 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 C16orf96A6NNT2 1141 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 KDELR3O43731 214 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 TMCC1O94876 653 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 PAK4O96013 591 aaPredicted RBP13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 UGT2B4P06133 528 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 JUPP14923 745 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 FZD2Q14332 565 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 POLD3Q15054 466 aaPredicted RBP13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 ZNF805Q5CZA5 627 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 EFHC2Q5JST6 749 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 ATXN7L2Q5T6C5 722 aaPredicted RBP13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 Q6ZSR6 202 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 SLFN11Q7Z7L1 901 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 ZSCAN30Q86W11 494 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 AOPEPQ8N6M6 819 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 FAM174AQ8TBP5 190 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 BAP1Q92560 729 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 NXPE2Q96DL1 559 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 IFT43Q96FT9 208 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 LRIG1Q96JA1 1093 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 FEM1CQ96JP0 617 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 KLF6Q99612 283 aaPredicted RBP13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 SCUBE2Q9NQ36 999 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 HPCAL4Q9UM19 191 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 HS3ST3A1Q9Y663 406 aa13.21□□□□□ -0.29
HMGCS1-205ENST00000508319 PTPRQQ9UMZ3 2332 aa13.21□□□□□ -0.3
HMGCS1-205ENST00000508319 LRRK1Q38SD2 2015 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 A0A087WV48 116 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 LY6G6EA0A0G2JKS1 128 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 SPTY2D1-AS1A0A0U1RR47 76 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 ZSCAN5CA6NGD5 496 aaPredicted RBP13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 KRIT1O00522 736 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 AREL1O15033 823 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 FFAR2O15552 330 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 TSPAN6O43657 245 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 EPHB2P29323 1055 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 AIF1P55008 147 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 SNRPD1P62314 119 aaKnown RBP13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 INSM1Q01101 510 aaPredicted RBP13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 OGDHQ02218 1023 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 TYRO3Q06418 890 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 TARDBPQ13148 414 aaKnown RBP eCLIP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms