RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 NEK3P51956 506 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 TAS2R38P59533 333 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 RACK1P63244 317 aaKnown RBP9.54□□□□□ -0.88
DDX41-209ENST00000508279 RAD51Q06609 339 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 ACAP1Q15027 740 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 SLC18A3Q16572 532 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 PARP15Q460N3 678 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 SLC45A4Q5BKX6 768 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 LRRC73Q5JTD7 316 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 TXNRD3NBQ6F5E7 133 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 IL27RAQ6UWB1 636 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 CYP4V2Q6ZWL3 525 aaPredicted RBP9.54□□□□□ -0.88
DDX41-209ENST00000508279 PARS2Q7L3T8 475 aaKnown RBP9.54□□□□□ -0.88
DDX41-209ENST00000508279 UMODL1-AS1Q8N2C9 162 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 PAF1Q8N7H5 531 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 OR2AP1Q8NGE2 309 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 SKA1Q96BD8 255 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 CCDC42Q96M95 316 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 GDAP1L1Q96MZ0 367 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 KLHL32Q96NJ5 620 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 DNAJC7Q99615 494 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 ORAI3Q9BRQ5 295 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 KDM4CQ9H3R0 1056 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 SP110Q9HB58 689 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 FZD3Q9NPG1 666 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 TM7SF3Q9NS93 570 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 SPTLC3Q9NUV7 552 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 DNAAF2Q9NVR5 837 aaKnown RBP9.54□□□□□ -0.88
DDX41-209ENST00000508279 DONSONQ9NYP3 566 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 CWC15Q9P013 229 aaKnown RBP9.54□□□□□ -0.88
DDX41-209ENST00000508279 MFHAS1Q9Y4C4 1052 aa9.54□□□□□ -0.88
DDX41-209ENST00000508279 GOLGA8CPA6NN73 597 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 EIF3CLB5ME19 914 aaKnown RBP9.53□□□□□ -0.88
DDX41-209ENST00000508279 AKR1B15C9JRZ8 316 aaPredicted RBP9.53□□□□□ -0.88
DDX41-209ENST00000508279 H0Y8X5 98 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 INSIG1O15503 277 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 PALMO75781 387 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 POP4O95707 220 aaKnown RBP9.53□□□□□ -0.88
DDX41-209ENST00000508279 GSRP00390 522 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 WNT1P04628 370 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 ADRB1P08588 477 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 H2AFZP0C0S5 128 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 RARAP10276 462 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 CEACAM1P13688 526 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 ADRB3P13945 408 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 CD59P13987 128 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 ITGB7P26010 798 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 HNRNPH3P31942 346 aaKnown RBP9.53□□□□□ -0.88
DDX41-209ENST00000508279 NDST2P52849 883 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 CDH6P55285 790 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 FOXC1Q12948 553 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 STAT4Q14765 748 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 HADHQ16836 314 aaKnown RBP9.53□□□□□ -0.88
DDX41-209ENST00000508279 MYLK3Q32MK0 819 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 SETMARQ53H47 684 aaPredicted RBP9.53□□□□□ -0.88
DDX41-209ENST00000508279 BOLA3Q53S33 107 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 SEL1L3Q68CR1 1132 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 ARHGAP36Q6ZRI8 547 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 H2AFVQ71UI9 128 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 CPNE8Q86YQ8 564 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 NAXDQ8IW45 347 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 TP53INP2Q8IXH6 220 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 ISG20Q96AZ6 181 aaKnown RBP9.53□□□□□ -0.88
DDX41-209ENST00000508279 EIF3CQ99613 913 aaKnown RBP9.53□□□□□ -0.88
DDX41-209ENST00000508279 CINPQ9BW66 212 aaPredicted RBP9.53□□□□□ -0.88
DDX41-209ENST00000508279 HDAC8Q9BY41 377 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 LRRC19Q9H756 370 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 NHEJ1Q9H9Q4 299 aaPredicted RBP9.53□□□□□ -0.88
DDX41-209ENST00000508279 PREBQ9HCU5 417 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 KLHL11Q9NVR0 708 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 ITM2BQ9Y287 266 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 LRRK1Q38SD2 2015 aa9.53□□□□□ -0.88
DDX41-209ENST00000508279 CACNA1AO00555 2505 aa9.52□□□□□ -0.88
DDX41-209ENST00000508279 SSU72P8A0A1W2PR75 194 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 C16orf96A6NNT2 1141 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 VILLO15195 856 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 PRAMEF11O60813 436 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 GJB3O75712 270 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 PIGNO95427 931 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 TNNT1P13805 278 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 CSRP1P21291 193 aaKnown RBP9.52□□□□□ -0.89
DDX41-209ENST00000508279 XPAP23025 273 aaPredicted RBP9.52□□□□□ -0.89
DDX41-209ENST00000508279 CCT8P50990 548 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 FAM193AP78312 1265 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 SIM1P81133 766 aaPredicted RBP9.52□□□□□ -0.89
DDX41-209ENST00000508279 SLC25A11Q02978 314 aaKnown RBP9.52□□□□□ -0.89
DDX41-209ENST00000508279 MMRN1Q13201 1228 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 DPYSQ14117 519 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 MESDQ14696 234 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 CYTH1Q15438 398 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 DPYSL2Q16555 572 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 ATP13A4Q4VNC1 1196 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 INO80DQ53TQ3 878 aaPredicted RBP9.52□□□□□ -0.89
DDX41-209ENST00000508279 CCDC157Q569K6 752 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 ZNF805Q5CZA5 627 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 CFAP58Q5T655 872 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 NAPEPLDQ6IQ20 393 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 TMCO3Q6UWJ1 677 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 GDPD4Q6W3E5 623 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 POLNQ7Z5Q5 900 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms