RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 WEE2P0C1S8 567 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 PSKH1P11801 424 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 ZNF182P17025 639 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 MAP4P27816 1152 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 ERP29P30040 261 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 RAB13P51153 203 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 CNTN2Q02246 1040 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 GCNT1Q02742 428 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 ZBTB16Q05516 673 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 DBPQ10586 325 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 TRAF2Q12933 501 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 ORC1Q13415 861 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 GCKRQ14397 625 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 RAB39AQ14964 217 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 CLCA4Q14CN2 919 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 KRT79Q5XKE5 535 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 C5orf46Q6UWT4 87 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 C12orf40Q86WS4 652 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 GRAMD1CQ8IYS0 662 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 TTC5Q8N0Z6 440 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 OR5T2Q8NGG2 359 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 SLC13A3Q8WWT9 602 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 BAP1Q92560 729 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 ZNF512Q96ME7 567 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 LBHD1Q9BQE6 289 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 PELOQ9BRX2 385 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 TRIM51Q9BSJ1 452 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 TUBGCP2Q9BSJ2 902 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 AP1M1Q9BXS5 423 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 CDC42EP4Q9H3Q1 356 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 CAB39LQ9H9S4 337 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 KCNH7Q9NS40 1196 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 CCDC59Q9P031 241 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 TRPS1Q9UHF7 1281 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 TSR3Q9UJK0 312 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 CNOT6Q9ULM6 557 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 ERVK-19Q9WJR5 959 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 ASB4Q9Y574 426 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 MYH14Q7Z406 1995 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 ANKRD36CQ5JPF3 1778 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 PTPRFP10586 1907 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 KLF11O14901 512 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 PPM1DO15297 605 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 SPOPO43791 374 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 HS6ST1O60243 411 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 SURF6O75683 361 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 TGM6O95932 706 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 BMP15O95972 392 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 URODP06132 367 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 ITGA4P13612 1032 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 MMP8P22894 467 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 ARNTP27540 789 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 NOS3P29474 1203 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 CD86P42081 329 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 HTR3AP46098 478 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 PPP5CP53041 499 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 RAB4BP61018 213 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 CDKL1Q00532 357 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 IL1RL1Q01638 556 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 CAV1Q03135 178 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 GK3PQ14409 553 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 PFKFB4Q16877 469 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 GEN1Q17RS7 908 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 KIZQ2M2Z5 673 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 SPATS1Q496A3 300 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 IRAK1BP1Q5VVH5 260 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 RRAGBQ5VZM2 374 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 THSD4Q6ZMP0 1018 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 STXBP4Q6ZWJ1 553 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 DYMQ7RTS9 669 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 CHSY1Q86X52 802 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 SLC9A9Q8IVB4 645 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 KLHL36Q8N4N3 616 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 DAGLBQ8NCG7 672 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 SLCO2A1Q92959 643 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 C18orf25Q96B23 403 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 ST6GAL2Q96JF0 529 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 SERPINB11Q96P15 392 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 CELF4Q9BZC1 486 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 TWSG1Q9GZX9 223 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 MLXIPLQ9NP71 852 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 ING3Q9NXR8 418 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 WHRNQ9P202 907 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 ZNF229Q9UJW7 825 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 ITGA11Q9UKX5 1188 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 MAP3K2Q9Y2U5 619 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 CHTOPQ9Y3Y2 248 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 C10orf71Q711Q0 1435 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 MARF1Q9Y4F3 1742 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 TULP4Q9NRJ4 1543 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 CCDC78A2IDD5 438 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 ARHGAP42A6NI28 874 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 ERVV-1B6SEH8 477 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 PRRT4C9JH25 899 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 TSPAN4O14817 238 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 PLD2O14939 933 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 SEC14L2O76054 403 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 KCNK2O95069 426 aa10.93□□□□□ -0.66
PDLIM5-210ENST00000508216 TRIM16O95361 564 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms