RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 CPEB1Q9BZB8 566 aaKnown RBP16.62■□□□□ 0.25
DDR1-261ENST00000507901 BTBD1Q9H0C5 482 aa16.62■□□□□ 0.25
DDR1-261ENST00000507901 KCNF1Q9H3M0 494 aa16.62■□□□□ 0.25
DDR1-261ENST00000507901 C6orf106Q9H6K1 298 aaPredicted RBP16.62■□□□□ 0.25
DDR1-261ENST00000507901 PILRBQ9UKJ0 227 aa16.62■□□□□ 0.25
DDR1-261ENST00000507901 hCG_1818297A0A087WSY0 165 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 MACROD2A1Z1Q3 448 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 PLK4O00444 970 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 INSIG1O15503 277 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 PLRG1O43660 514 aaKnown RBP16.61■□□□□ 0.25
DDR1-261ENST00000507901 BNIP3LO60238 219 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 FOXD2O60548 495 aaPredicted RBP16.61■□□□□ 0.25
DDR1-261ENST00000507901 PALMO75781 387 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 RNASEH2AO75792 299 aaKnown RBP16.61■□□□□ 0.25
DDR1-261ENST00000507901 POP4O95707 220 aaKnown RBP16.61■□□□□ 0.25
DDR1-261ENST00000507901 SEMA4FO95754 770 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 ITGB7P26010 798 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 RECQLP46063 649 aaPredicted RBP16.61■□□□□ 0.25
DDR1-261ENST00000507901 RHOAP61586 193 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 FOXK2Q01167 660 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 ZNF33AQ06730 810 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 NSUN2Q08J23 767 aaKnown RBP eCLIP16.61■□□□□ 0.25
DDR1-261ENST00000507901 SPEM2Q0P670 501 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 PUM1Q14671 1186 aaKnown RBP eCLIP16.61■□□□□ 0.25
DDR1-261ENST00000507901 PPP2R5EQ16537 467 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 TMCO4Q5TGY1 634 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 ERMP1Q7Z2K6 904 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 FAM124AQ86V42 546 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 RCOR2Q8IZ40 523 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 PGBD5Q8N414 524 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 ATPAF2Q8N5M1 289 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 TSEN2Q8NCE0 465 aaKnown RBP16.61■□□□□ 0.25
DDR1-261ENST00000507901 OR6K2Q8NGY2 324 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 GRIN3AQ8TCU5 1115 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 ALG3Q92685 438 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 HDAC11Q96DB2 347 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 RMDN1Q96DB5 314 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 GDAP1L1Q96MZ0 367 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 HERPUD2Q9BSE4 406 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 TSGA10Q9BZW7 698 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 SP110Q9HB58 689 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 TMEM74BQ9NUR3 256 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 FARP1Q9Y4F1 1045 aaPredicted RBP16.61■□□□□ 0.25
DDR1-261ENST00000507901 LAMA1P25391 3075 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 PLXNA2O75051 1894 aa16.61■□□□□ 0.25
DDR1-261ENST00000507901 TSPAN11A1L157 253 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 CCDC66A2RUB6 948 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 DDX3YO15523 660 aaKnown RBP16.6■□□□□ 0.25
DDR1-261ENST00000507901 MAP3K13O43283 966 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 IGHV4-34P06331 123 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 TNNT1P13805 278 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 ITPKAP23677 461 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 CCNCP24863 283 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 PTPN7P35236 360 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 HOXD12P35452 270 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 MPLP40238 635 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 DHPSP49366 369 aaPredicted RBP16.6■□□□□ 0.25
DDR1-261ENST00000507901 DNA2P51530 1060 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 SFSWAPQ12872 951 aaKnown RBP16.6■□□□□ 0.25
DDR1-261ENST00000507901 LBRQ14739 615 aaKnown RBP16.6■□□□□ 0.25
DDR1-261ENST00000507901 IFI16Q16666 785 aaKnown RBP16.6■□□□□ 0.25
DDR1-261ENST00000507901 TFDP3Q5H9I0 405 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 LYSMD4Q5XG99 296 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 DEFB119Q8N690 84 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 FOXJ1Q92949 421 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 HSPA12BQ96MM6 686 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 MGME1Q9BQP7 344 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 ARRDC1-AS1Q9H2J1 176 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 KDM4CQ9H3R0 1056 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 SEPT3Q9UH03 358 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 EVLQ9UI08 416 aaPredicted RBP16.6■□□□□ 0.25
DDR1-261ENST00000507901 NCKAP1Q9Y2A7 1128 aa16.6■□□□□ 0.25
DDR1-261ENST00000507901 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.6■□□□□ 0.25
DDR1-261ENST00000507901 APOL1O14791 398 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 SPINT1O43278 529 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 LATO43561 262 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 NDUFS2O75306 463 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 GJB3O75712 270 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 ZRANB2O95218 330 aaKnown RBP eCLIP16.59■□□□□ 0.25
DDR1-261ENST00000507901 MAP3K6O95382 1288 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 IGSF6O95976 241 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 CCDC175P0C221 793 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 KRT10P13645 584 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 ZFXP17010 805 aaPredicted RBP16.59■□□□□ 0.25
DDR1-261ENST00000507901 NAP1L1P55209 391 aaKnown RBP16.59■□□□□ 0.25
DDR1-261ENST00000507901 COPS2P61201 443 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 PPIDQ08752 370 aaKnown RBP16.59■□□□□ 0.25
DDR1-261ENST00000507901 HNRNPDQ14103 355 aaKnown RBP16.59■□□□□ 0.25
DDR1-261ENST00000507901 CSRP2Q16527 193 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 POM121L1PQ3SYA9 428 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 ZFYVE27Q5T4F4 411 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 DCAF12L1Q5VU92 463 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 ALG1LQ6GMV1 187 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 NCEH1Q6PIU2 408 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 NPNTQ6UXI9 565 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 ERN2Q76MJ5 926 aaKnown RBP16.59■□□□□ 0.25
DDR1-261ENST00000507901 PARS2Q7L3T8 475 aaKnown RBP16.59■□□□□ 0.25
DDR1-261ENST00000507901 ARMCX6Q7L4S7 300 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 SYT12Q8IV01 421 aa16.59■□□□□ 0.25
DDR1-261ENST00000507901 OR2T34Q8NGX1 318 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms