RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 PNPLA8Q9NP80 782 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 PRDM5Q9NQX1 630 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-206ENST00000507875 HECAQ9UBI9 543 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-206ENST00000507875 LCMT1Q9UIC8 334 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 SLC39A10Q9ULF5 831 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 PADI3Q9ULW8 664 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 NENFQ9UMX5 172 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 SNX12Q9UMY4 172 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 PCDHB2Q9Y5E7 798 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 PTPRJQ12913 1337 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 FAM170AA1A519 330 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 MYO1FO00160 1098 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 ZNF185O15231 689 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 ERLIN1O75477 346 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 RECQL4O94761 1208 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 PCDH8O95206 1070 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 NOP2P46087 812 aaKnown RBP7.32□□□□□ -1.24
CLCN3-206ENST00000507875 DCAF7P61962 342 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 HTRA4P83105 476 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-206ENST00000507875 BEND6Q5SZJ8 279 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-206ENST00000507875 KAZNQ674X7 775 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 FOXR1Q6PIV2 292 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 RAPH1Q70E73 1250 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 TMEM52Q8NDY8 209 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 SEPT8Q92599 483 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 SGCDQ92629 289 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 ZNF668Q96K58 619 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-206ENST00000507875 CAPZA3Q96KX2 299 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 NOX5Q96PH1 765 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 DMRTA2Q96SC8 542 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 AGPAT1Q99943 283 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.32□□□□□ -1.24
CLCN3-206ENST00000507875 FUT8Q9BYC5 575 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 MTMR12Q9C0I1 747 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 ACSS2Q9NR19 701 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 GINS2Q9Y248 185 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 RWDD3Q9Y3V2 267 aa7.32□□□□□ -1.24
CLCN3-206ENST00000507875 UMODL1Q5DID0 1318 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 A0A087X0T9 212 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 MED7O43513 233 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 EPN2O95208 641 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 CXCL10P02778 98 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 FAM228BP0C875 321 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 SNRPBP14678 240 aaKnown RBP7.31□□□□□ -1.24
CLCN3-206ENST00000507875 SLC5A3P53794 718 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 VSNL1P62760 191 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 CDR2Q01850 454 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 GABPB1Q06547 395 aaPredicted RBP7.31□□□□□ -1.24
CLCN3-206ENST00000507875 CNGA2Q16280 664 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 TRIM60Q495X7 471 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 SETMARQ53H47 684 aaPredicted RBP7.31□□□□□ -1.24
CLCN3-206ENST00000507875 SMUG1Q53HV7 270 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 WDR93Q6P2C0 686 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 UNC93AQ86WB7 457 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 CREG2Q8IUH2 290 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 ZNF566Q969W8 418 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 RMDN2Q96LZ7 410 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 TTPALQ9BTX7 342 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 EIF2AQ9BY44 585 aaKnown RBP7.31□□□□□ -1.24
CLCN3-206ENST00000507875 ZNF518BQ9C0D4 1074 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 XYLT2Q9H1B5 865 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 ADAM7Q9H2U9 754 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 DDX18Q9NVP1 670 aaKnown RBP7.31□□□□□ -1.24
CLCN3-206ENST00000507875 GDAP2Q9NXN4 497 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 KIF17Q9P2E2 1029 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 TCFL5Q9UL49 500 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 MAN2B2Q9Y2E5 1009 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 CEP290O15078 2479 aa7.31□□□□□ -1.24
CLCN3-206ENST00000507875 FAM229AH3BQW9 127 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 PIRO00625 290 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 MAP2K7O14733 419 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 DOK2O60496 412 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 PFKMP08237 780 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 CLTBP09497 229 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 DESP17661 470 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 TCP1P17987 556 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 ACO1P21399 889 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 TNNT3P45378 269 aaPredicted RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 SLC16A1P53985 500 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 CSE1LP55060 971 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 MYL6P60660 151 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 AP2B1P63010 937 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 INCA1Q0VD86 236 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 BNIP1Q12981 228 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 GRIK3Q13003 919 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 ADRM1Q16186 407 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 LRIT3Q3SXY7 679 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 SLC24A5Q71RS6 500 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 CENPIQ92674 756 aaPredicted RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 VCPIP1Q96JH7 1222 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 MAELQ96JY0 434 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 PPP1R10Q96QC0 940 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 OSBPL9Q96SU4 736 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 CNPPD1Q9BV87 410 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 DUSP23Q9BVJ7 150 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 RIC8BQ9NVN3 520 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 SIX4Q9UIU6 781 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 GPR34Q9UPC5 381 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 TSC2P49815 1807 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 FNDC1Q4ZHG4 1894 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms