RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 PPP2R3BQ9Y5P8 575 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 OTOFQ9HC10 1997 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.09■□□□□ 0.17
SCLT1-208ENST00000506368 E7ENX8 843 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 B4GALT4O60513 344 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 DNAJB5O75953 348 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 C2P06681 752 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 CYP2C9P11712 490 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 TCN1P20061 433 aaPredicted RBP16.09■□□□□ 0.17
SCLT1-208ENST00000506368 SDC4P31431 198 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 GRIA1P42261 906 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 RPS6P62753 249 aaKnown RBP16.09■□□□□ 0.17
SCLT1-208ENST00000506368 ITGA7Q13683 1181 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 PSMD5Q16401 504 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 FSTL4Q6MZW2 842 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 KCNT2Q6UVM3 1135 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 TAMM41Q96BW9 452 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 TMEM176AQ96HP8 235 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 FEM1CQ96JP0 617 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 TSPYL2Q9H2G4 693 aaPredicted RBP16.09■□□□□ 0.17
SCLT1-208ENST00000506368 JPH1Q9HDC5 661 aaPredicted RBP16.09■□□□□ 0.17
SCLT1-208ENST00000506368 ZNF358Q9NW07 568 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 PSME2Q9UL46 239 aa16.09■□□□□ 0.17
SCLT1-208ENST00000506368 MAGEB16A2A368 324 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 M0QYV0 167 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 PLOD2O00469 737 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 SOCS2O14508 198 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 PFDN6O15212 129 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 DYNC1LI2O43237 492 aaPredicted RBP16.08■□□□□ 0.16
SCLT1-208ENST00000506368 AQP9O43315 295 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 USP2O75604 605 aaPredicted RBP16.08■□□□□ 0.16
SCLT1-208ENST00000506368 SRP72O76094 671 aaKnown RBP16.08■□□□□ 0.16
SCLT1-208ENST00000506368 AMHP03971 560 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 CHRNGP07510 517 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 FASP25445 335 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 CSRP3P50461 194 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 BNIP2Q12982 314 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 BNIP3Q12983 259 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 MTERF2Q49AM1 385 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 CCNYL2Q5T2Q4 361 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 C8orf82Q6P1X6 216 aaPredicted RBP16.08■□□□□ 0.16
SCLT1-208ENST00000506368 SPRED1Q7Z699 444 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 STRA8Q7Z7C7 330 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 CMC1Q7Z7K0 106 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 VSIG10LQ86VR7 867 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 SNX31Q8N9S9 440 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCLT1-208ENST00000506368 S100ZQ8WXG8 99 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 OTUD5Q96G74 571 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 MUC13Q9H3R2 512 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 HMG20AQ9NP66 347 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 RCOR3Q9P2K3 495 aaPredicted RBP16.08■□□□□ 0.16
SCLT1-208ENST00000506368 NXF1Q9UBU9 619 aaKnown RBP16.08■□□□□ 0.16
SCLT1-208ENST00000506368 CPSF3Q9UKF6 684 aaKnown RBP16.08■□□□□ 0.16
SCLT1-208ENST00000506368 TLK1Q9UKI8 766 aa16.08■□□□□ 0.16
SCLT1-208ENST00000506368 BBIP1A8MTZ0 92 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 RASAL1O95294 804 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 KCNA2P16389 499 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 NELFEP18615 380 aaKnown RBP16.07■□□□□ 0.16
SCLT1-208ENST00000506368 FGFR3P22607 806 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 ATP4BP51164 291 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 ATP6AP1Q15904 470 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 ANO4Q32M45 955 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 SUPT20HL1Q3ZLR7 823 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 REP15Q6BDI9 236 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 ABHD15Q6UXT9 468 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 SCARA5Q6ZMJ2 495 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 TMEM26Q6ZUK4 368 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 KCTD8Q6ZWB6 473 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 ZDHHC17Q8IUH5 632 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 SLC15A4Q8N697 577 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 COLGALT1Q8NBJ5 622 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 CENPNQ96H22 339 aaPredicted RBP16.07■□□□□ 0.16
SCLT1-208ENST00000506368 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 ZDHHC2Q9UIJ5 367 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 TCAF1Q9Y4C2 921 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 CPQQ9Y646 472 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 KRBA1A5PL33 1030 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 PRORSD1PA6NEY8 169 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 CLDN25C9JDP6 229 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 KDM1AO60341 852 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 SEC14L2O76054 403 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 CKMT2P17540 419 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 CAPGP40121 348 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 HNRNPFP52597 415 aaKnown RBP16.07■□□□□ 0.16
SCLT1-208ENST00000506368 ATXN3P54252 364 aaPredicted RBP16.07■□□□□ 0.16
SCLT1-208ENST00000506368 SESN2P58004 480 aaPredicted RBP16.07■□□□□ 0.16
SCLT1-208ENST00000506368 ATP6V0D1P61421 351 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 HTRA3P83110 453 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 OCA2Q04671 838 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 C6orf10Q5SRN2 563 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 AGAP7PQ5VUJ5 663 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 OR6B2Q6IFH4 312 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 SCYL2Q6P3W7 929 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 PIWIL4Q7Z3Z4 852 aaKnown RBP16.07■□□□□ 0.16
SCLT1-208ENST00000506368 TMEM135Q86UB9 458 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 FAM156AQ8NDB6 213 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 STYXQ8WUJ0 223 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 LPAR1Q92633 364 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 TANKQ92844 425 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms