RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 C16orf96A6NNT2 1141 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 DPYSL4O14531 572 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 RFPL1O75677 317 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 LRIG2O94898 1065 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 MT-CYBP00156 380 aaPredicted RBP13.41□□□□□ -0.26
SPCS3-201ENST00000503362 MMP3P08254 477 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 PIRTP0C851 137 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 MPP1Q00013 466 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 LSM12Q3MHD2 195 aaKnown RBP13.41□□□□□ -0.26
SPCS3-201ENST00000503362 SLC39A12Q504Y0 691 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 ANKS6Q68DC2 871 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 ARHGAP17Q68EM7 881 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 SLC9A4Q6AI14 798 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 GK5Q6ZS86 529 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 MIER2Q8N344 545 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 SLC35F5Q8WV83 523 aa13.41□□□□□ -0.26
SPCS3-201ENST00000503362 FCRL2Q96LA5 508 aaPredicted RBP13.41□□□□□ -0.26
SPCS3-201ENST00000503362 TBC1D4O60343 1298 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 CHRNGP07510 517 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 WNT3AP56704 352 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 POLD3Q15054 466 aaPredicted RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 FSCN1Q16658 493 aaKnown RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 LIN52Q52LA3 116 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 ATP6AP1LQ52LC2 224 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 PKN3Q6P5Z2 889 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 GPR142Q7Z601 462 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 PTGR2Q8N8N7 351 aaPredicted RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 DCUN1D1Q96GG9 259 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 CASS4Q9NQ75 786 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 AK5Q9Y6K8 562 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 COL1A2P08123 1366 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 COL22A1Q8NFW1 1626 aaPredicted RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 YJEFN3A6XGL0 299 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 CLOCKO15516 846 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 CRTAMO95727 393 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 AQP4P55087 323 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 CHRNB3Q05901 458 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 ZNF460Q14592 562 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 MIPEPQ99797 713 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 KCTD14Q9BQ13 255 aaPredicted RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 GLOD4Q9HC38 313 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 SEMA4BQ9NPR2 832 aaPredicted RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 VPS9D1Q9Y2B5 631 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 DDX60LQ5H9U9 1706 aaKnown RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 MYO1GB0I1T2 1018 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 FGF10O15520 208 aaPredicted RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 CYP2C18P33260 490 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 IRF9Q00978 393 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 POTEHQ6S545 545 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 RBM44Q6ZP01 1051 aaKnown RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 CLVS1Q8IUQ0 354 aaPredicted RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 B4GALNT2Q8NHY0 566 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 PANX3Q96QZ0 392 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 BEGAINQ9BUH8 593 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 PNPLA8Q9NP80 782 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 SPAG4Q9NPE6 437 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 LZTS1Q9Y250 596 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 PSAT1Q9Y617 370 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 SMIM31A0A1B0GVY4 71 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 CBX4O00257 560 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 MSI1O43347 362 aaKnown RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 BRCC3P46736 316 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 ZNF177Q13360 481 aaPredicted RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 SLC5A9Q2M3M2 681 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 SLC9B1Q4ZJI4 515 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 PLEKHG4Q58EX7 1191 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 CXCL17Q6UXB2 119 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 FAM156AQ8NDB6 213 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 KLHL5Q96PQ7 755 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 HNRNPABQ99729 332 aaKnown RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 GBA3Q9H227 469 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 TXNRD2Q9NNW7 524 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 TAS2R13Q9NYV9 303 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 BLOC1S6Q9UL45 172 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 SCN7AQ01118 1682 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 STRCP1A6NGW2 1772 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 MAST2Q6P0Q8 1798 aa13.4□□□□□ -0.26
SPCS3-201ENST00000503362 MYO18AQ92614 2054 aaKnown RBP13.4□□□□□ -0.26
SPCS3-201ENST00000503362 TREHO43280 583 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 SLC11A2P49281 568 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 OXCT1P55809 520 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 PCBP1Q15365 356 aaKnown RBP eCLIP13.39□□□□□ -0.27
SPCS3-201ENST00000503362 NR6A1Q15406 480 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 SDHAF4Q5VUM1 108 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 ARHGAP22Q7Z5H3 698 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 DENND6AQ8IWF6 608 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 TRPC4APQ8TEL6 797 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 HDAC10Q969S8 669 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 COL4A1P02462 1669 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 MYBPHLA2RUH7 354 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 EDN1P05305 212 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 RECQLP46063 649 aaPredicted RBP13.39□□□□□ -0.27
SPCS3-201ENST00000503362 CLCN5P51795 746 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 SQLEQ14534 574 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 VEPH1Q14D04 833 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 TMEM198Q66K66 360 aa13.39□□□□□ -0.27
SPCS3-201ENST00000503362 ESRP1Q6NXG1 681 aaKnown RBP13.39□□□□□ -0.27
SPCS3-201ENST00000503362 FSTL5Q8N475 847 aaPredicted RBP13.39□□□□□ -0.27
SPCS3-201ENST00000503362 ENDOVQ8N8Q3 282 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms