RNA–Protein interactions for RNA: ENST00000497316.5

COL1A2-212, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-212ENST00000497316 LHX3Q9UBR4 397 aa16.32■□□□□ 0.2
COL1A2-212ENST00000497316 EIF2B4Q9UI10 523 aaKnown RBP16.32■□□□□ 0.2
COL1A2-212ENST00000497316 IPO11Q9UI26 975 aaKnown RBP16.32■□□□□ 0.2
COL1A2-212ENST00000497316 GON4LQ3T8J9 2241 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 A0A1W2PPC4 97 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 MED19A0JLT2 244 aaPredicted RBP16.31■□□□□ 0.2
COL1A2-212ENST00000497316 GOLGA6L6A8MZA4 724 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 DFFAO00273 331 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 SLC30A4O14863 429 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 BCAT2O15382 392 aaPredicted RBP16.31■□□□□ 0.2
COL1A2-212ENST00000497316 LATO43561 262 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 FSBPO95073 299 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 CD48P09326 243 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 KDELR1P24390 212 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 NUDT1P36639 197 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 CSNK1DP48730 415 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 MMRN1Q13201 1228 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 PAFAH1B3Q15102 231 aaKnown RBP16.31■□□□□ 0.2
COL1A2-212ENST00000497316 ANKRD20A8PQ5CZ79 823 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 TMCO4Q5TGY1 634 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 RAD9BQ6WBX8 426 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 ERN2Q76MJ5 926 aaKnown RBP16.31■□□□□ 0.2
COL1A2-212ENST00000497316 RYBPQ8N488 228 aaPredicted RBP16.31■□□□□ 0.2
COL1A2-212ENST00000497316 PCDH19Q8TAB3 1148 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 GRIN3AQ8TCU5 1115 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 ORAI3Q9BRQ5 295 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 EDEM2Q9BV94 578 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 CALN1Q9BXU9 219 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 CPEB1Q9BZB8 566 aaKnown RBP16.31■□□□□ 0.2
COL1A2-212ENST00000497316 SP110Q9HB58 689 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 PREBQ9HCU5 417 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 RXFP3Q9NSD7 469 aa16.31■□□□□ 0.2
COL1A2-212ENST00000497316 PCDH15Q96QU1 1955 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TBC1D3DA0A087WVF3 549 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TBC1D3IA0A087WXS9 549 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TBC1D3EA0A087X179 549 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TBC1D3KA0A087X1G2 549 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TBC1D3FA6NER0 549 aaPredicted RBP16.3■□□□□ 0.2
COL1A2-212ENST00000497316 FAM47DPA6NHR8 397 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 BTNL10A8MVZ5 291 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TBC1D3LB9A6J9 549 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 RNF103O00237 685 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 PLK4O00444 970 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 KRIT1O00522 736 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 GDF9O60383 454 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 PALMO75781 387 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 CFIP05156 583 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 SYPP08247 313 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TBC1D3HP0C7X1 549 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 GJC1P36383 396 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 NOP2P46087 812 aaKnown RBP16.3■□□□□ 0.2
COL1A2-212ENST00000497316 NEK3P51956 506 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TAS2R38P59533 333 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 NSUN2Q08J23 767 aaKnown RBP eCLIP16.3■□□□□ 0.2
COL1A2-212ENST00000497316 GRM3Q14832 879 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 POM121L1PQ3SYA9 428 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 ZNF805Q5CZA5 627 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TBC1D3GQ6DHY5 549 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TBC1D3CQ6IPX1 549 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TRIM69Q86WT6 500 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TP53INP2Q8IXH6 220 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 RHOT1Q8IXI2 618 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 TBC1D3Q8IZP1 549 aaPredicted RBP16.3■□□□□ 0.2
COL1A2-212ENST00000497316 ZCCHC9Q8N567 271 aaKnown RBP16.3■□□□□ 0.2
COL1A2-212ENST00000497316 SPC24Q8NBT2 197 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 HCAR2Q8TDS4 363 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 RAB7BQ96AH8 199 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 ZDHHC5Q9C0B5 715 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 MIR1-1HGQ9H1L0 117 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 ZDHHC6Q9H6R6 413 aa16.3■□□□□ 0.2
COL1A2-212ENST00000497316 DDX56Q9NY93 547 aaKnown RBP16.3■□□□□ 0.2
COL1A2-212ENST00000497316 ARHGAP33O14559 1287 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 PJA2O43164 708 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 AP1G1O43747 822 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 BUB1BO60566 1050 aaPredicted RBP16.29■□□□□ 0.2
COL1A2-212ENST00000497316 MAFKO60675 156 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 ENGP17813 658 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 COMTP21964 271 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 GSDMDP57764 484 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 ZFYVE27Q5T4F4 411 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 ATXN7L2Q5T6C5 722 aaPredicted RBP16.29■□□□□ 0.2
COL1A2-212ENST00000497316 STPG1Q5TH74 334 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 NCBP2-AS2Q69YL0 99 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 C11orf63Q6NUN7 778 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 GDPD4Q6W3E5 623 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 ARHGAP36Q6ZRI8 547 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 ZSCAN30Q86W11 494 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 OR6K2Q8NGY2 324 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 SNX19Q92543 992 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 RAPGEF5Q92565 580 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 RNF157Q96PX1 679 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 PSKH2Q96QS6 385 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 TMEM9BQ9NQ34 198 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 DKK3Q9UBP4 350 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 SEPT3Q9UH03 358 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 REXO2Q9Y3B8 237 aaKnown RBP16.29■□□□□ 0.2
COL1A2-212ENST00000497316 ALG6Q9Y672 507 aa16.29■□□□□ 0.2
COL1A2-212ENST00000497316 DCDC2BA2VCK2 349 aa16.28■□□□□ 0.2
COL1A2-212ENST00000497316 CDX4O14627 284 aaPredicted RBP16.28■□□□□ 0.2
COL1A2-212ENST00000497316 PSTPIP1O43586 416 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms