RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 MPP1Q00013 466 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 SEPT6Q14141 434 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 NAA25Q14CX7 972 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 CNGA3Q16281 694 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 VARS2Q5ST30 1063 aaKnown RBP11.21□□□□□ -0.62
CMSS1-208ENST00000496116 ARTNQ5T4W7 220 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 ACBD5Q5T8D3 534 aaPredicted RBP11.21□□□□□ -0.62
CMSS1-208ENST00000496116 VWA5B1Q5TIE3 1220 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 MARC1Q5VT66 337 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 SDHAF4Q5VUM1 108 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 C1orf146Q5VVC0 180 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 LRRC8EQ6NSJ5 796 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 KIAA0408Q6ZU52 694 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 SLC41A1Q8IVJ1 513 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 FSTL5Q8N475 847 aaPredicted RBP11.21□□□□□ -0.62
CMSS1-208ENST00000496116 GPATCH11Q8N954 259 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 C2CD4AQ8NCU7 369 aaPredicted RBP11.21□□□□□ -0.62
CMSS1-208ENST00000496116 DNAJC9Q8WXX5 260 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 FTHL17Q9BXU8 183 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.21□□□□□ -0.62
CMSS1-208ENST00000496116 TRPV6Q9H1D0 765 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 CXorf56Q9H5V9 222 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 SP110Q9HB58 689 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 ARNT2Q9HBZ2 717 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 PRDM5Q9NQX1 630 aaPredicted RBP11.21□□□□□ -0.62
CMSS1-208ENST00000496116 TMEM248Q9NWD8 314 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 GEMIN8Q9NWZ8 242 aaKnown RBP11.21□□□□□ -0.62
CMSS1-208ENST00000496116 ZNF212Q9UDV6 495 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 SLC7A8Q9UHI5 535 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 ANGPTL2Q9UKU9 493 aa11.21□□□□□ -0.62
CMSS1-208ENST00000496116 MIA3Q5JRA6 1907 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 A0A087X1B8 175 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 MOXD2PA6NHM9 499 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 TMEM88BA6NKF7 163 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 SLCO1B7G3V0H7 640 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 NVLO15381 856 aaKnown RBP11.2□□□□□ -0.62
CMSS1-208ENST00000496116 TBX10O75333 385 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 SNUPNO95149 360 aaKnown RBP11.2□□□□□ -0.62
CMSS1-208ENST00000496116 RTN3O95197 1032 aaPredicted RBP11.2□□□□□ -0.62
CMSS1-208ENST00000496116 ACADSP16219 412 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 ATP6V1C1P21283 382 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 ARNTP27540 789 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 GRK4P32298 578 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 CPOXP36551 454 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 GLRBP48167 497 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 RPL14P50914 215 aaKnown RBP11.2□□□□□ -0.62
CMSS1-208ENST00000496116 WNT3AP56704 352 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 ACTR3P61158 418 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 FAM189BP81408 668 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 POU4F1Q01851 419 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 ITKQ08881 620 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 EFEMP1Q12805 493 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 PRKAA1Q13131 559 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 PCSK7Q16549 785 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 CTXN3Q4LDR2 81 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 MS4A13Q5J8X5 152 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 SNX30Q5VWJ9 437 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 SEL1L3Q68CR1 1132 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 ZNF470Q6ECI4 717 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 ZNF280DQ6N043 979 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 RIPOR1Q6ZS17 1223 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 KDELC2Q7Z4H8 507 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 ZNF354CQ86Y25 554 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 STYXQ8WUJ0 223 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 KCTD4Q8WVF5 259 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 IMP4Q96G21 291 aaKnown RBP11.2□□□□□ -0.62
CMSS1-208ENST00000496116 ELMO2Q96JJ3 720 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 BTN2A3PQ96KV6 586 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 ZIC5Q96T25 663 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 OXCT2Q9BYC2 517 aaPredicted RBP11.2□□□□□ -0.62
CMSS1-208ENST00000496116 ATXN3LQ9H3M9 355 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 TCF7L2Q9NQB0 619 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 CLIC5Q9NZA1 410 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 GMIPQ9P107 970 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 DOCK4Q8N1I0 1966 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 MEI4A8MW99 385 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 HDAC3O15379 428 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 YWHAQP27348 245 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 GPR15P49685 360 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 SERPINH1P50454 418 aaKnown RBP11.2□□□□□ -0.62
CMSS1-208ENST00000496116 AP2B1P63010 937 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 SLC9B1Q4ZJI4 515 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 NEPROQ6NW34 567 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 KDELC1Q6UW63 502 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 LRRC74BQ6ZQY2 392 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 TFAP2DQ7Z6R9 452 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 LMNTD2Q8IXW0 634 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 ABI1Q8IZP0 508 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 CENPLQ8N0S6 344 aaPredicted RBP11.2□□□□□ -0.62
CMSS1-208ENST00000496116 TMEM151AQ8N4L1 468 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 POU5F2Q8N7G0 328 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 DTX3LQ8TDB6 740 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 FBXO32Q969P5 355 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 PABPC5Q96DU9 382 aaKnown RBP11.2□□□□□ -0.62
CMSS1-208ENST00000496116 RANBP9Q96S59 729 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 NOL6Q9H6R4 1146 aaKnown RBP11.2□□□□□ -0.62
CMSS1-208ENST00000496116 NT5MQ9NPB1 228 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 TLR8Q9NR97 1041 aaKnown RBP11.2□□□□□ -0.62
CMSS1-208ENST00000496116 XPR1Q9UBH6 696 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 VTI1BQ9UEU0 232 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms