RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 IGLV3-27P01718 113 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 HLA-DQB2P05538 268 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 HMBSP08397 361 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 HOXB8P17481 243 aaPredicted RBP7.02□□□□□ -1.29
USP39-219ENST00000496047 TACR2P21452 398 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 CES1P23141 567 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 GRK2P25098 689 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 DNAJB1P25685 340 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 VARSP26640 1264 aaKnown RBP7.02□□□□□ -1.29
USP39-219ENST00000496047 OR1E1P30953 314 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 CD68P34810 354 aaPredicted RBP7.02□□□□□ -1.29
USP39-219ENST00000496047 CA8P35219 290 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 SCTRP47872 440 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 ARFIP2P53365 341 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 EPHB3P54753 998 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 CDH4P55283 916 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 ZBTB16Q05516 673 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 CDK18Q07002 472 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 DUSP4Q13115 394 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 BMPR2Q13873 1038 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 SEPT6Q14141 434 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 BTG3Q14201 252 aaPredicted RBP7.02□□□□□ -1.29
USP39-219ENST00000496047 ZRSR2Q15696 482 aaKnown RBP7.02□□□□□ -1.29
USP39-219ENST00000496047 SLC14A2Q15849 920 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 MAP7D1Q3KQU3 841 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 TRIM60Q495X7 471 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 ANKRD20A4Q4UJ75 823 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 PABPC1LQ4VXU2 614 aaKnown RBP7.02□□□□□ -1.29
USP39-219ENST00000496047 RTP2Q5QGT7 225 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 PIK3R6Q5UE93 754 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 RAP1GAP2Q684P5 730 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 RAPH1Q70E73 1250 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 STRA8Q7Z7C7 330 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 TMEM135Q86UB9 458 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 RNF135Q8IUD6 432 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 WDR75Q8IWA0 830 aaKnown RBP7.02□□□□□ -1.29
USP39-219ENST00000496047 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.02□□□□□ -1.29
USP39-219ENST00000496047 ARHGAP12Q8IWW6 846 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 KLHDC8BQ8IXV7 354 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 GPR65Q8IYL9 337 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 KIRREL3Q8IZU9 778 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 ELMOD1Q8N336 334 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 TMEM199Q8N511 208 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 RDH11Q8TC12 318 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 ADAMTS19Q8TE59 1207 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 GIPC2Q8TF65 315 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 CCT6BQ92526 530 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 AZIN2Q96A70 460 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 TSPAN17Q96FV3 270 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 IGSF21Q96ID5 467 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 SERAC1Q96JX3 654 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 C7orf26Q96N11 449 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 RANBP9Q96S59 729 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 SLC13A1Q9BZW2 595 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 MAGEH1Q9H213 219 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 STN1Q9H668 368 aaKnown RBP7.02□□□□□ -1.29
USP39-219ENST00000496047 ANLNQ9NQW6 1124 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 PRDM5Q9NQX1 630 aaPredicted RBP7.02□□□□□ -1.29
USP39-219ENST00000496047 SPG21Q9NZD8 308 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 MPP6Q9NZW5 540 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 SLC17A7Q9P2U7 560 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 LSM7Q9UK45 103 aaKnown RBP7.02□□□□□ -1.29
USP39-219ENST00000496047 NUDT5Q9UKK9 219 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 TCAF1Q9Y4C2 921 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 ALPK3Q96L96 1907 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 PIKFYVEQ9Y2I7 2098 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 COL4A6Q14031 1691 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 A0A1B0GVM2 712 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 TCAF2A6NFQ2 919 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 DRGXA6NNA5 263 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 CXorf49A8MYA2 514 aaPredicted RBP7.01□□□□□ -1.29
USP39-219ENST00000496047 FOXO6A8MYZ6 492 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 C2CD2LO14523 706 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 AXIN1O15169 862 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 TBC1D4O60343 1298 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 USP12O75317 370 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 PMPCBO75439 489 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 CLDN11O75508 207 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 RFPL1O75677 317 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 HAUS5O94927 633 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 SNUPNO95149 360 aaKnown RBP7.01□□□□□ -1.29
USP39-219ENST00000496047 MYCP01106 439 aaPredicted RBP7.01□□□□□ -1.29
USP39-219ENST00000496047 FGF1P05230 155 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 RHOCP08134 193 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 SERPINF2P08697 491 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 ZDHHC11BP0C7U3 371 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 DHRS4L1P0CG22 281 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 ERVK-10P10266 1014 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 HLA-DPA1P20036 260 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 FOXN2P32314 431 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 OR1D2P34982 312 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 PBX3P40426 434 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 GRIA1P42261 906 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 GATMP50440 423 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 SERPINH1P50454 418 aaKnown RBP7.01□□□□□ -1.29
USP39-219ENST00000496047 HK2P52789 917 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 OXCT1P55809 520 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 CRADDP78560 199 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 DSG1Q02413 1049 aa7.01□□□□□ -1.29
USP39-219ENST00000496047 TLE2Q04725 743 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms