RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 Q6ZVU0 165 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 CFAP52Q8N1V2 620 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 Q8NA96 180 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 RTP4Q96DX8 246 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 MYEOVQ96EZ4 313 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 CCDC74BQ96LY2 380 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 CCDC114Q96M63 670 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 PPP1R9BQ96SB3 815 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 ZPBPQ9BS86 351 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 SLC25A23Q9BV35 468 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 NT5C1AQ9BXI3 368 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 DNAI2Q9GZS0 605 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 MLXIPLQ9NP71 852 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 FOXD4L1Q9NU39 408 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 SLC25A13Q9UJS0 675 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 PCDHGB7Q9Y5F8 929 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 MRPS18BQ9Y676 258 aaKnown RBP11.16□□□□□ -0.62
TRIM59-206ENST00000494486 EIF3DO15371 548 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRIM59-206ENST00000494486 B4GAT1O43505 415 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 BNIP3LO60238 219 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 DPM1O60762 260 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 RECKO95980 971 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 FURINP09958 794 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 CD99P14209 185 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 CLCN1P35523 988 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 EIF4A3P38919 411 aaKnown RBP11.15□□□□□ -0.62
TRIM59-206ENST00000494486 STAT5AP42229 794 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 TKTL1P51854 596 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 LIMK2P53671 638 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 BIRC3Q13489 604 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 SEMA5AQ13591 1074 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 NCOA4Q13772 614 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 C14orf28Q4W4Y0 310 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 BSPRYQ5W0U4 402 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 PAPD7Q5XG87 772 aaKnown RBP11.15□□□□□ -0.62
TRIM59-206ENST00000494486 ANKS6Q68DC2 871 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 PIGZQ86VD9 579 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 HPS6Q86YV9 775 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 RASSF8Q8NHQ8 419 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 EDEM1Q92611 657 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 C19orf60Q96EN9 201 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 PPP1R16AQ96I34 528 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 ABCC13Q9NSE7 274 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 CROTQ9UKG9 612 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 TMEM184BQ9Y519 407 aaPredicted RBP11.15□□□□□ -0.62
TRIM59-206ENST00000494486 FADS3Q9Y5Q0 445 aa11.15□□□□□ -0.62
TRIM59-206ENST00000494486 ZNF106Q9H2Y7 1883 aaKnown RBP11.15□□□□□ -0.63
TRIM59-206ENST00000494486 IGLON5A6NGN9 336 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 AP1G1O43747 822 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 KRT86O43790 486 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 RASGRP1O95267 797 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 PDGFRAP16234 1089 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 BPIP17213 487 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 NEK3P51956 506 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 AP3M2P53677 418 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 MAP7Q14244 749 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 HLTFQ14527 1009 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRIM59-206ENST00000494486 SGSM1Q2NKQ1 1148 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 AMZ1Q400G9 498 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 BHLHA9Q7RTU4 235 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 HID1Q8IV36 788 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 ESX1Q8N693 406 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 CENPTQ96BT3 561 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 SNRNP40Q96DI7 357 aaKnown RBP11.14□□□□□ -0.63
TRIM59-206ENST00000494486 TWNKQ96RR1 684 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 NUDT22Q9BRQ3 303 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 ULBP1Q9BZM6 244 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 OCIAD1Q9NX40 245 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 ZNF451Q9Y4E5 1061 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 KLF2Q9Y5W3 355 aaPredicted RBP11.14□□□□□ -0.63
TRIM59-206ENST00000494486 RPS6KL1Q9Y6S9 549 aa11.14□□□□□ -0.63
TRIM59-206ENST00000494486 CDC14CA4D256 554 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 A6NCN8 305 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 TMEM110-MUSTN1A8MSY1 372 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 LRRTM2O43300 516 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 DNAJB5O75953 348 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 STK17BO94768 372 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 F8A1P23610 371 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 TBX4P57082 545 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 SLC8A3P57103 927 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 INCA1Q0VD86 236 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 ART3Q13508 389 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 MSANTD2Q6P1R3 559 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 CEACAM20Q6UY09 585 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 CDH24Q86UP0 819 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 FAM129CQ86XR2 697 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 SH2D3CQ8N5H7 860 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 OR4D9Q8NGE8 314 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 SPATA3Q8NHX4 192 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 NDRG1Q92597 394 aaKnown RBP11.13□□□□□ -0.63
TRIM59-206ENST00000494486 TAF4BQ92750 862 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 PNPLA2Q96AD5 504 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 ELMO3Q96BJ8 720 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 RANBP9Q96S59 729 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 TMUB1Q9BVT8 246 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 NUCKS1Q9H1E3 243 aaKnown RBP11.13□□□□□ -0.63
TRIM59-206ENST00000494486 LUZP4Q9P127 313 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 COPG2Q9UBF2 871 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 UNC13CQ8NB66 2214 aa11.13□□□□□ -0.63
TRIM59-206ENST00000494486 TSPAN6O43657 245 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms