RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 TLK1Q9UKI8 766 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 MAGED2Q9UNF1 606 aaPredicted RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 ZNF840PA6NDX5 716 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 ADAM12O43184 909 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 TOP3BO95985 862 aaKnown RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 MMP2P08253 660 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 CDH4P55283 916 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 KCNJ2P63252 427 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 TLE2Q04725 743 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 LBRQ14739 615 aaKnown RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 CES4AQ5XG92 561 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 ALG1LQ6GMV1 187 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 DEFB128Q7Z7B8 93 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 WDR75Q8IWA0 830 aaKnown RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 BBS5Q8N3I7 341 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 C2CD4AQ8NCU7 369 aaPredicted RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 OR6Y1Q8NGX8 325 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 PPP4R1Q8TF05 950 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 ZNF512Q96ME7 567 aaPredicted RBP10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 VN1R3Q9BXE9 311 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 CRISPLD2Q9H0B8 497 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 TBX21Q9UL17 535 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 MAFFQ9ULX9 164 aa10.93□□□□□ -0.66
PHACTR4-204ENST00000493669 TMEM114B3SHH9 223 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 HGSO14964 777 aaPredicted RBP10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 CCDC22O60826 627 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 VAPBO95292 243 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 EPOP01588 193 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 T-ENOLP0DO92 83 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 ARNTP27540 789 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 CD86P42081 329 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 SLC1A6P48664 564 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 DSG1Q02413 1049 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 GRM3Q14832 879 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 TBCCQ15814 346 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 TRIM60Q495X7 471 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 ESRP1Q6NXG1 681 aaKnown RBP10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 ZNF354CQ86Y25 554 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 LGI2Q8N0V4 545 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 ARRDC2Q8TBH0 407 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 PIWIL2Q8TC59 973 aaKnown RBP10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 NACA2Q9H009 215 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 PDFQ9HBH1 243 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 TRPM5Q9NZQ8 1165 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 SORCS3Q9UPU3 1222 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 COL4A6Q14031 1691 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 LOC285095A0A1B0GVY8 99 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 ABHD14A-ACY1A0A1B0GW23 586 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 RALBP11234 206 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 TARSP26639 723 aaKnown RBP10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 CRABP2P29373 138 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 SERPINB3P29508 390 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 ATN1P54259 1190 aaPredicted RBP10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 ITKQ08881 620 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 SLC12A1Q13621 1099 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 TSTD2Q5T7W7 516 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 CHST9Q7L1S5 443 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 C10orf107Q8IVU9 208 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 FEM1CQ96JP0 617 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 ZNF558Q96NG5 402 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 KLHL5Q96PQ7 755 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 DDX50Q9BQ39 737 aaKnown RBP10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 CLSTN3Q9BQT9 956 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 NMRAL1Q9HBL8 299 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 SLC39A10Q9ULF5 831 aa10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 RPL26L1Q9UNX3 145 aaKnown RBP10.92□□□□□ -0.66
PHACTR4-204ENST00000493669 CLDN11O75508 207 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 AHSGP02765 367 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 HMGA1P17096 107 aaKnown RBP10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 HLA-DPA1P20036 260 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 PTPN4P29074 926 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 CD151P48509 253 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 KCNQ1P51787 676 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 IRX4P78413 519 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 DSC2Q02487 901 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 MSLNQ13421 630 aaPredicted RBP10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 ZNF235Q14590 738 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 USP10Q14694 798 aaKnown RBP10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 RFTN1Q14699 578 aaPredicted RBP10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 VEPH1Q14D04 833 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 SMAD1Q15797 465 aaKnown RBP10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 CNGA3Q16281 694 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 GPR65Q8IYL9 337 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 SLC39A11Q8N1S5 342 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 SLC7A6OSQ96CW6 309 aaPredicted RBP10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 ATXN7L3BQ96GX2 97 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 TLE6Q9H808 572 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 HAO1Q9UJM8 370 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 CHD5Q8TDI0 1954 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 LTBP2Q14767 1821 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 SLC7A4O43246 635 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 LATS1O95835 1130 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 FGF1P05230 155 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 KRT16P08779 473 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 ALOX15P16050 662 aaPredicted RBP10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 KCNA4P22459 653 aa10.91□□□□□ -0.66
PHACTR4-204ENST00000493669 CALB2P22676 271 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms