RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 NFATC3Q12968 1075 aa18■□□□□ 0.47
NUP50-218ENST00000493456 EIF2B5Q13144 721 aaKnown RBP18■□□□□ 0.47
NUP50-218ENST00000493456 TTI2Q6NXR4 508 aa18■□□□□ 0.47
NUP50-218ENST00000493456 SLC26A9Q7LBE3 791 aa18■□□□□ 0.47
NUP50-218ENST00000493456 SLC35F3Q8IY50 421 aa18■□□□□ 0.47
NUP50-218ENST00000493456 WDTC1Q8N5D0 677 aa18■□□□□ 0.47
NUP50-218ENST00000493456 RAB7BQ96AH8 199 aa18■□□□□ 0.47
NUP50-218ENST00000493456 CCDC3Q9BQI4 270 aa18■□□□□ 0.47
NUP50-218ENST00000493456 C1QTNF2Q9BXJ5 285 aa18■□□□□ 0.47
NUP50-218ENST00000493456 PIGVQ9NUD9 493 aa18■□□□□ 0.47
NUP50-218ENST00000493456 PCDHGC3Q9UN70 934 aa18■□□□□ 0.47
NUP50-218ENST00000493456 PCDHGA7Q9Y5G6 932 aa18■□□□□ 0.47
NUP50-218ENST00000493456 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18■□□□□ 0.47
NUP50-218ENST00000493456 BICDL2A1A5D9 508 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 ILVBLA1L0T0 632 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 DRGXA6NNA5 263 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 SPINT1O43278 529 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 ENDOD1O94919 500 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 OR1E1P30953 314 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 CXCR3P49682 368 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 CCNHP51946 323 aaPredicted RBP17.99■□□□□ 0.47
NUP50-218ENST00000493456 MARSP56192 900 aaKnown RBP17.99■□□□□ 0.47
NUP50-218ENST00000493456 SLC6A3Q01959 620 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 DRAP1Q14919 205 aaPredicted RBP17.99■□□□□ 0.47
NUP50-218ENST00000493456 CARD16Q5EG05 197 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 PRRT3Q5FWE3 981 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 TPRG1LQ5T0D9 272 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 OTUD1Q5VV17 481 aaPredicted RBP17.99■□□□□ 0.47
NUP50-218ENST00000493456 ESRP1Q6NXG1 681 aaKnown RBP17.99■□□□□ 0.47
NUP50-218ENST00000493456 PARS2Q7L3T8 475 aaKnown RBP17.99■□□□□ 0.47
NUP50-218ENST00000493456 TFAP2DQ7Z6R9 452 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 ZNF397Q8NF99 534 aaPredicted RBP17.99■□□□□ 0.47
NUP50-218ENST00000493456 C1orf74Q96LT6 269 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 IL17BQ9UHF5 180 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 STAP1Q9ULZ2 295 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 PTPN13Q12923 2485 aa17.99■□□□□ 0.47
NUP50-218ENST00000493456 IGLV3-10A0A075B6K4 115 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 IGLON5A6NGN9 336 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 TMX2-CTNND1H3BSU7 103 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 NTN3O00634 580 aaPredicted RBP17.98■□□□□ 0.47
NUP50-218ENST00000493456 PLD2O14939 933 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 GCATO75600 419 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 ITGB2P05107 769 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 ANXA6P08133 673 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 THOP1P52888 689 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 SMYD5Q6GMV2 418 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 ZDHHC17Q8IUH5 632 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 PHACTR4Q8IZ21 702 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 RBFAQ8N0V3 343 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 EXD3Q8N9H8 876 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 C1orf131Q8NDD1 294 aaKnown RBP17.98■□□□□ 0.47
NUP50-218ENST00000493456 ARHGEF26Q96DR7 871 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 PGAP3Q96FM1 320 aaPredicted RBP17.98■□□□□ 0.47
NUP50-218ENST00000493456 NPY6RQ99463 290 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 SLC13A1Q9BZW2 595 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 GDPD2Q9HCC8 539 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 ATP13A1Q9HD20 1204 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 ANLNQ9NQW6 1124 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 ACSL6Q9UKU0 697 aa17.98■□□□□ 0.47
NUP50-218ENST00000493456 CXorf51AA0A1B0GTR3 108 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 BECN2A8MW95 431 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 NEMP1O14524 444 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 TOR1BO14657 336 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 ZMPSTE24O75844 475 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 GJB6O95452 261 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 F9P00740 461 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 ERBB2P04626 1255 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 KRT10P13645 584 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 CD44P16070 742 aaKnown RBP17.97■□□□□ 0.47
NUP50-218ENST00000493456 DNA2P51530 1060 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 ADKP55263 362 aaKnown RBP17.97■□□□□ 0.47
NUP50-218ENST00000493456 YPEL5P62699 121 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 KLHL10Q6JEL2 608 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 TRIM65Q6PJ69 517 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 PASD1Q8IV76 773 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 PLPP6Q8IY26 295 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 OR7D4Q8NG98 312 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 SGF29Q96ES7 293 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 LRRC61Q9BV99 259 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 ZDHHC6Q9H6R6 413 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 SYNCQ9H7C4 482 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 SYNDIG1Q9H7V2 258 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 STARD5Q9NSY2 213 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.97■□□□□ 0.47
NUP50-218ENST00000493456 MPP6Q9NZW5 540 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 PADI4Q9UM07 663 aa17.97■□□□□ 0.47
NUP50-218ENST00000493456 RP1P56715 2156 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 I6L893 689 aaPredicted RBP17.96■□□□□ 0.47
NUP50-218ENST00000493456 TERTO14746 1132 aaKnown RBP17.96■□□□□ 0.47
NUP50-218ENST00000493456 EFSO43281 561 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 SLC5A2P31639 672 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 USP8P40818 1118 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 SULT1E1P49888 294 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 INHBCP55103 352 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 ARF5P84085 180 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 LINC00303Q3SY05 128 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 MACC1Q6ZN28 852 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 USP53Q70EK8 1073 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 FBXO39Q8N4B4 442 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 ARL10Q8N8L6 244 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms