RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 PIKFYVEQ9Y2I7 2098 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 COL4A2P08572 1712 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 A0A087WUV0 522 aaPredicted RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 CCDC78A2IDD5 438 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 AP3B1O00203 1094 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 INSIG1O15503 277 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 HOXC11O43248 304 aaPredicted RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 RIPK2O43353 540 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 ATP8B1O43520 1251 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 AVILO75366 819 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 PAPLNO95428 1278 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 SLC4A1P02730 911 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 IVLP07476 585 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 FCARP24071 287 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 HLA-FP30511 346 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 LTBRP36941 435 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 RECQLP46063 649 aaPredicted RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 STK19P49842 368 aaPredicted RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 SERPINH1P50454 418 aaKnown RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 EPHB1P54762 984 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 WNT3AP56704 352 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 SNRPD1P62314 119 aaKnown RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 CDK16Q00536 496 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 SULT2A1Q06520 285 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 TNK2Q07912 1038 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 CDH17Q12864 832 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 SMAD4Q13485 552 aaKnown RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 OLIG2Q13516 323 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 RUNX3Q13761 415 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 DMC1Q14565 340 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 FASTKD3Q14CZ7 662 aaKnown RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 KYNUQ16719 465 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 CTC1Q2NKJ3 1217 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 KRT71Q3SY84 523 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 CCDC38Q502W7 563 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 FNDC3BQ53EP0 1204 aaKnown RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 CEP85LQ5SZL2 805 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 ATXN7L2Q5T6C5 722 aaPredicted RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 LRRC8BQ6P9F7 803 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 PARM1Q6UWI2 310 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 METTL3Q86U44 580 aaKnown RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 PGBD5Q8N414 524 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 MREGQ8N565 214 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 TEX26Q8N6G2 289 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 CNTD1Q8N815 330 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 SMRP1Q8NCR6 262 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 MCUQ8NE86 351 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 PPHLN1Q8NEY8 458 aaKnown RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 CYB5D2Q8WUJ1 264 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 UCMAQ8WVF2 138 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 FGF14Q92915 247 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 FATE1Q969F0 183 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 ACDQ96AP0 544 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 ZNF669Q96BR6 464 aaPredicted RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 STAMBPL1Q96FJ0 436 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 OXNAD1Q96HP4 312 aaPredicted RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 MSLNLQ96KJ4 702 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 MGME1Q9BQP7 344 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 CCDC77Q9BR77 488 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 MLPHQ9BV36 600 aaPredicted RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 TRMT61BQ9BVS5 477 aaKnown RBP8.15□□□□□ -1.1
FDPS-218ENST00000492887 PLA2G2FQ9BZM2 168 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 TNKS2Q9H2K2 1166 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 TRPV4Q9HBA0 871 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 SYBUQ9NX95 663 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 BCCIPQ9P287 314 aaKnown RBP eCLIP8.15□□□□□ -1.1
FDPS-218ENST00000492887 NUMBLQ9Y6R0 609 aa8.15□□□□□ -1.1
FDPS-218ENST00000492887 LAMA2P24043 3122 aaKnown RBP8.15□□□□□ -1.11
FDPS-218ENST00000492887 ANKRD12Q6UB98 2062 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 PLXNB3Q9ULL4 1909 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.14□□□□□ -1.11
FDPS-218ENST00000492887 EXOC1LA0A1B0GW35 172 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 TLDC2A0PJX2 215 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.14□□□□□ -1.11
FDPS-218ENST00000492887 POC1B-GALNT4F8VUJ3 575 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 GFRA2O00451 464 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 MBTPS2O43462 519 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 OPA1O60313 960 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 CACNG3O60359 315 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 TULP3O75386 442 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 ECI2O75521 394 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 AGTP01019 485 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 ASLP04424 464 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 APODP05090 189 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 ATP5BP06576 529 aaKnown RBP8.14□□□□□ -1.11
FDPS-218ENST00000492887 MLNP12872 115 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 SSTR1P30872 391 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 GRIA1P42261 906 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 CTSOP43234 321 aaPredicted RBP8.14□□□□□ -1.11
FDPS-218ENST00000492887 MAGEA6P43360 314 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 CRADDP78560 199 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 ECT2LQ008S8 904 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 RAD51Q06609 339 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 NIPAL4Q0D2K0 466 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 GALNT3Q14435 633 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 POU6F1Q14863 301 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 CYTH1Q15438 398 aa8.14□□□□□ -1.11
FDPS-218ENST00000492887 SMAD1Q15797 465 aaKnown RBP8.14□□□□□ -1.11
FDPS-218ENST00000492887 UAP1Q16222 522 aaPredicted RBP8.14□□□□□ -1.11
FDPS-218ENST00000492887 GEN1Q17RS7 908 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms