RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ZDHHC6Q9H6R6 413 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 SEPT11Q9NVA2 429 aaKnown RBP12.67□□□□□ -0.38
COL6A1-205ENST00000492851 IPO11Q9UI26 975 aaKnown RBP12.67□□□□□ -0.38
COL6A1-205ENST00000492851 MYO6Q9UM54 1294 aa12.67□□□□□ -0.38
COL6A1-205ENST00000492851 ZFR2Q9UPR6 939 aaKnown RBP12.67□□□□□ -0.38
COL6A1-205ENST00000492851 FCF1Q9Y324 198 aaKnown RBP12.67□□□□□ -0.38
COL6A1-205ENST00000492851 PLXNA2O75051 1894 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 A0A087WV48 116 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 C16orf96A6NNT2 1141 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 EIF3CLB5ME19 914 aaKnown RBP12.66□□□□□ -0.38
COL6A1-205ENST00000492851 TOR1BO14657 336 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 EPHB6O15197 1021 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 BUB1O43683 1085 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 CD160O95971 181 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 EPHB2P29323 1055 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 TARDBPQ13148 414 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL6A1-205ENST00000492851 PTK2BQ14289 1009 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 GRM3Q14832 879 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 PARP15Q460N3 678 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 SEL1L3Q68CR1 1132 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 SCYL2Q6P3W7 929 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 DCUN1D2Q6PH85 259 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 KYAT3Q6YP21 454 aaKnown RBP12.66□□□□□ -0.38
COL6A1-205ENST00000492851 PHLDB2Q86SQ0 1253 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 TTC7BQ86TV6 843 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 ZNF354CQ86Y25 554 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 RTL3Q8N8U3 475 aaKnown RBP12.66□□□□□ -0.38
COL6A1-205ENST00000492851 DENND6BQ8NEG7 585 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 OR13H1Q8NG92 308 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 HCAR2Q8TDS4 363 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 BTN2A2Q8WVV5 523 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 PCDHB18PQ96TA0 734 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 EIF3CQ99613 913 aaKnown RBP12.66□□□□□ -0.38
COL6A1-205ENST00000492851 CNPY3Q9BT09 278 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 C1QTNF2Q9BXJ5 285 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 TTYH3Q9C0H2 523 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 NLGN3Q9NZ94 848 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 CLCA2Q9UQC9 943 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 RAXQ9Y2V3 346 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 MFHAS1Q9Y4C4 1052 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 CSNK1G3Q9Y6M4 447 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 IGF2RP11717 2491 aa12.66□□□□□ -0.38
COL6A1-205ENST00000492851 ZZEF1O43149 2961 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 SPTY2D1-AS1A0A0U1RR47 76 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 FAM170AA1A519 330 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 WASH4PA8MWX3 477 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 FAM72CH0Y354 149 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 KRIT1O00522 736 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 SCAMP1O15126 338 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 FGF10O15520 208 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-205ENST00000492851 SIGLEC6O43699 453 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 SDC3O75056 442 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 PIAS2O75928 621 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 IGSF6O95976 241 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 CSF2P04141 144 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 GP1BAP07359 652 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 CKMT1AP12532 417 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 CLDN2P57739 230 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 RTP5Q14D33 572 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 FILIP1LQ4L180 1135 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 CCDC183Q5T5S1 534 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 HES3Q5TGS1 186 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 FAM72AQ5TYM5 149 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 ACAD10Q6JQN1 1059 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 FAM72DQ6L9T8 149 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 GDPD4Q6W3E5 623 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 GCNT7Q6ZNI0 430 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 MON1BQ7L1V2 547 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 PARS2Q7L3T8 475 aaKnown RBP12.65□□□□□ -0.38
COL6A1-205ENST00000492851 PTAR1Q7Z6K3 402 aaPredicted RBP12.65□□□□□ -0.38
COL6A1-205ENST00000492851 FAM72BQ86X60 149 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 CCDC185Q8N715 623 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 FAM181AQ8N9Y4 354 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 BMFQ96LC9 184 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 GDAP1L1Q96MZ0 367 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 MYOCQ99972 504 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 TM6SF2Q9BZW4 377 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 FZD3Q9NPG1 666 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 NDFIP2Q9NV92 336 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 PARVAQ9NVD7 372 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 DNAJC28Q9NX36 388 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 CA5BQ9Y2D0 317 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 AK5Q9Y6K8 562 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 WDFY3Q8IZQ1 3526 aa12.65□□□□□ -0.38
COL6A1-205ENST00000492851 CFAP47Q6ZTR5 3102 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 SMTNL1A8MU46 457 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 TRIM38O00635 465 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 RRP8O43159 456 aaKnown RBP12.64□□□□□ -0.39
COL6A1-205ENST00000492851 TNFAIP3P21580 790 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 YPEL5P62699 121 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 C19orf48Q6RUI8 117 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 LRRC69Q6ZNQ3 347 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 PARGQ86W56 976 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 UMODL1-AS1Q8N2C9 162 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 DCBLD1Q8N8Z6 715 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 HNRNPLLQ8WVV9 542 aaKnown RBP12.64□□□□□ -0.39
COL6A1-205ENST00000492851 BAP1Q92560 729 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 GRAMD1AQ96CP6 724 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 KLHL32Q96NJ5 620 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 NCAPGQ9BPX3 1015 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms