RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 FTH1P19P0C7X4 201 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SNHG28P0DPA3 235 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 PDHBP11177 359 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 UCHL3P15374 230 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CYP11B2P19099 503 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SCP2P22307 547 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 EDNRBP24530 442 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 YY1P25490 414 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CERS1P27544 350 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 EPHB2P29323 1055 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ATP5DP30049 168 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ALDH1B1P30837 517 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ALDH3A1P30838 453 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 PRKAR1BP31321 381 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CHRNA3P32297 505 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CIITAP33076 1130 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 HSD17B3P37058 310 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CETN2P41208 172 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 EPS15P42566 896 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 KLK7P49862 253 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 RASSF2P50749 326 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 PDE6CP51160 858 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CLCN2P51788 898 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CCNG1P51959 295 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 POLGP54098 1239 aaPredicted RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 PMS2P54278 862 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 GALCP54803 685 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC12A3P55017 1021 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC8A3P57103 927 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 LILRA4P59901 499 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 MAGOHP61326 146 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TUBA4AP68366 448 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 HOXA4Q00056 320 aaPredicted RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 MAP2K1Q02750 393 aaPredicted RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ENPEPQ07075 957 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 C2orf54Q08AI8 447 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 COASYQ13057 564 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 NOGQ13253 232 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 GTF2H3Q13889 308 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 DHX34Q14147 1143 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC29A2Q14542 456 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ODF1Q14990 250 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 PPP2R5AQ15172 486 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 LRRC41Q15345 812 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SNCBQ16143 134 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC15A2Q16348 729 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 PGS1Q32NB8 556 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 Q4G0T1 1027 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ZCWPW2Q504Y3 356 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TDRD12Q587J7 1177 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TTMPQ5BVD1 217 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TNFAIP8L3Q5GJ75 292 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 KIAA1755Q5JYT7 1200 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 COLEC12Q5KU26 742 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF618Q5T7W0 954 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 DEPDC1Q5TB30 811 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 KCTD16Q68DU8 428 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF626Q68DY1 528 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 DUPD1Q68J44 220 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 RGS7BPQ6MZT1 257 aaPredicted RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC18B1Q6NT16 456 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 NFRKBQ6P4R8 1299 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC2A7Q6PXP3 512 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TRMT10CQ7L0Y3 403 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 PARS2Q7L3T8 475 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 EPM2AIP1Q7L775 607 aaPredicted RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 BHLHA9Q7RTU4 235 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF720Q7Z2F6 126 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF804AQ7Z570 1209 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ANKS1BQ7Z6G8 1248 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 HOOK3Q86VS8 718 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CATSPER3Q86XQ3 398 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 DZIP1Q86YF9 867 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 APLFQ8IW19 511 aaPredicted RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 KLHL7Q8IXQ5 586 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ADGRF4Q8IZF3 695 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SAMD3Q8N6K7 520 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TEX9Q8N6V9 391 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 UBL4BQ8N7F7 174 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 MAB21L3Q8N8X9 362 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 GPATCH11Q8N954 259 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 LRRC57Q8N9N7 239 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC197Q8NCU1 140 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ABHD11Q8NFV4 315 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SEMA6DQ8NFY4 1073 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CFAP61Q8NHU2 1237 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SMCR8Q8TEV9 937 aaPredicted RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SCARB1Q8WTV0 552 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SCFD1Q8WVM8 642 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 UBLCP1Q8WVY7 318 aaPredicted RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CCT6BQ92526 530 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CELF1Q92879 486 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CUL5Q93034 780 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 RPL36ALQ969Q0 106 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 PPP2R3CQ969Q6 453 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 MAGOHBQ96A72 148 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 FUBP1Q96AE4 644 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ZBTB9Q96C00 473 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TLCD1Q96CP7 247 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 HOOK2Q96ED9 719 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms