RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 EIF2B5Q13144 721 aaKnown RBP7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 EIF2S3LQ2VIR3 472 aaKnown RBP7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 NEK5Q6P3R8 708 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 TIPARPQ7Z3E1 657 aaKnown RBP7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 SLITRK4Q8IW52 837 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 MFN1Q8IWA4 741 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 SYCP3Q8IZU3 236 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 RBFAQ8N0V3 343 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 ZNF557Q8N988 423 aaPredicted RBP7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 TEX19Q8NA77 164 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 ZNF417Q8TAU3 575 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 CPT1CQ8TCG5 803 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 LMX1AQ8TE12 382 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 SYAP1Q96A49 352 aaPredicted RBP7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 TMEM159Q96B96 161 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 SLC45A3Q96JT2 553 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 HEXIM2Q96MH2 286 aaKnown RBP7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 ZNF587Q96SQ5 575 aaPredicted RBP7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 LRRC61Q9BV99 259 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 CPEB1Q9BZB8 566 aaKnown RBP7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 CLPBQ9H078 707 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 CDH19Q9H159 772 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 CASS4Q9NQ75 786 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 PRDM8Q9NQV8 689 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 PPM1HQ9ULR3 514 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 NAALADL1Q9UQQ1 740 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 HBS1LQ9Y450 684 aaKnown RBP7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 HS3ST3A1Q9Y663 406 aa7.31□□□□□ -1.24
PDLIM1-203ENST00000490391 PCSK5Q92824 1860 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 GOLGA6L7A0A1B0GV03 622 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 FRMD3A2A2Y4 597 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 RAD51BO15315 384 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 YY2O15391 372 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 CNTN5O94779 1100 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 FBXO45P0C2W1 286 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 TNNI1P19237 187 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 HOXD13P35453 343 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 ATP1A2P50993 1020 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 YWHAGP61981 247 aaKnown RBP eCLIP7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 RPS24P62847 133 aaKnown RBP7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 CYP24A1Q07973 514 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 CDC20Q12834 499 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 TRPC3Q13507 836 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 FGL2Q14314 439 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 C16orf72Q14CZ0 275 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 PSMD6Q15008 389 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 ANKRD1Q15327 319 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 SNRNP35Q16560 246 aaKnown RBP7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 ZNF699Q32M78 642 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 RAB41Q5JT25 222 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 ARL6IP4Q66PJ3 421 aaKnown RBP7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 SEL1L3Q68CR1 1132 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 TCTN3Q6NUS6 607 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 UNC93AQ86WB7 457 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 SLC34A3Q8N130 599 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 KYQ8NBH2 561 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 GPBAR1Q8TDU6 330 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 APOBEC4Q8WW27 367 aaKnown RBP7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 GLMNQ92990 594 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 TP53INP1Q96A56 240 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 AK8Q96MA6 479 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 CMKLR1Q99788 373 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 UNKQ9C0B0 810 aaKnown RBP7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 LRRN3Q9H3W5 708 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 STIM2Q9P246 746 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 PCDHGA3Q9Y5H0 932 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 CROCCQ5TZA2 2017 aa7.3□□□□□ -1.24
PDLIM1-203ENST00000490391 EFCAB7A8K855 629 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 MCF2LO15068 1137 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 IRAK2O43187 625 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 MSI1O43347 362 aaKnown RBP7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 HNRNPRO43390 633 aaKnown RBP7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 VNN1O95497 513 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 IGLV3-27P01718 113 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 PDGFAP04085 211 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 PRKAR1AP10644 381 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 CCL4P13236 92 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 NID1P14543 1247 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 GAP43P17677 238 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 NOS2P35228 1153 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 UBA7P41226 1012 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 RABIFP47224 123 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 ADKP55263 362 aaKnown RBP7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 MRPL49Q13405 166 aaKnown RBP7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 C1orf61Q13536 156 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 ALCAMQ13740 583 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 PDE1CQ14123 709 aaPredicted RBP7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 DEFB109BQ30KR1 87 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 ZNF667Q5HYK9 610 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 FAM46CQ5VWP2 391 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 PM20D1Q6GTS8 502 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 NADSYN1Q6IA69 706 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 APCDD1Q8J025 514 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 ARHGAP18Q8N392 663 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 IL22RA1Q8N6P7 574 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 ARL10Q8N8L6 244 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 HJURPQ8NCD3 748 aaPredicted RBP7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 PLEKHO2Q8TD55 490 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 PDCD6IPQ8WUM4 868 aaKnown RBP7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 OR8D1Q8WZ84 308 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms