RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 LINGO4Q6UY18 593 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 CENPUQ71F23 418 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 LINC00523Q86TU6 105 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 AHI1Q8N157 1196 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 PDIK1LQ8N165 341 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 ATP11CQ8NB49 1132 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 TTC8Q8TAM2 541 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 CSGALNACT1Q8TDX6 532 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 WFIKKN2Q8TEU8 576 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 PRCCQ92733 491 aaPredicted RBP7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 CAVIN3Q969G5 261 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 ASIC4Q96FT7 647 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 LMLNQ96KR4 655 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 GDAP1L1Q96MZ0 367 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 REPIN1Q9BWE0 567 aaKnown RBP7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 PHF7Q9BWX1 381 aaPredicted RBP7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 POLR1EQ9GZS1 481 aaKnown RBP7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 SLC25A51Q9H1U9 297 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 BRD9Q9H8M2 597 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 HPS4Q9NQG7 708 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 EIF2B3Q9NR50 452 aaKnown RBP7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 UBP1Q9NZI7 540 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 DEC1Q9P2X7 70 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 FAM153AQ9UHL3 310 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 SLC25A13Q9UJS0 675 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 FBXO10Q9UK96 956 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 INTS6Q9UL03 887 aaKnown RBP7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 SLC8A2Q9UPR5 921 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 FAM50BQ9Y247 325 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 ACTL7AQ9Y615 435 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 NUMBLQ9Y6R0 609 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 TTC28Q96AY4 2481 aa7.68□□□□□ -1.18
APOBEC3A-203ENST00000488758 CXorf51AA0A1B0GTR3 108 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 TCRBV7S3A2A0A539 114 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 ANHXE9PGG2 379 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 AP3B1O00203 1094 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 TP73O15350 636 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 EIF3HO15372 352 aaKnown RBP eCLIP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 TIMM44O43615 452 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 PPFIA2O75334 1257 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 TULP3O75386 442 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 PMPCBO75439 489 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 TMCC1O94876 653 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 TMEM63AO94886 807 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 AP2A1O95782 977 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 S1PR4O95977 384 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 ATP5BP06576 529 aaKnown RBP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 SERPINF2P08697 491 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 CD86P42081 329 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 MAGEA6P43360 314 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 SLC6A11P48066 632 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 SERPINH1P50454 418 aaKnown RBP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 SCNN1BP51168 640 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 PMS2P54278 862 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 RHOAP61586 193 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 ECT2LQ008S8 904 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 DSC2Q02487 901 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 NSUN2Q08J23 767 aaKnown RBP eCLIP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 NIPAL4Q0D2K0 466 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 MPP3Q13368 585 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 SPARCL1Q14515 664 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 HIF1AQ16665 826 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 ITPRIPL2Q3MIP1 535 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 BBS9Q3SYG4 887 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 FUT11Q495W5 492 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 ACCSLQ4AC99 568 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 DNAJC21Q5F1R6 531 aaKnown RBP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 GRAMD4Q6IC98 578 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 NAPEPLDQ6IQ20 393 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 HDXQ7Z353 690 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 KIAA0907Q7Z7F0 614 aaPredicted RBP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 PGBD5Q8N414 524 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 DNAAF3Q8N9W5 541 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 TSEN2Q8NCE0 465 aaKnown RBP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 MCUQ8NE86 351 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 SPATA22Q8NHS9 363 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 NXPE3Q969Y0 559 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 TTC17Q96AE7 1141 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 IMP4Q96G21 291 aaKnown RBP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 PWWP2AQ96N64 755 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 NECAB3Q96P71 396 aaPredicted RBP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 PSKH2Q96QS6 385 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 RBM15Q96T37 977 aaKnown RBP eCLIP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 SEMA3CQ99985 751 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 RPP25Q9BUL9 199 aaKnown RBP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 LRRC40Q9H9A6 602 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 XAB2Q9HCS7 855 aaKnown RBP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 SAYSD1Q9NPB0 183 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 VPS45Q9NRW7 570 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 GTSE1Q9NYZ3 720 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 SLC27A6Q9Y2P4 619 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 FCF1Q9Y324 198 aaKnown RBP7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 CDH23Q9H251 3354 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 DOCK8Q8NF50 2099 aa7.67□□□□□ -1.18
APOBEC3A-203ENST00000488758 CHD5Q8TDI0 1954 aa7.66□□□□□ -1.18
APOBEC3A-203ENST00000488758 TTC24A2A3L6 582 aaPredicted RBP7.66□□□□□ -1.18
APOBEC3A-203ENST00000488758 TBC1D3BA6NDS4 549 aa7.66□□□□□ -1.18
APOBEC3A-203ENST00000488758 SDR42E2A6NKP2 422 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms