RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 PPIDQ08752 370 aaKnown RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 KCNAB2Q13303 367 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 ADAM9Q13443 819 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 TRA2AQ13595 282 aaKnown RBP eCLIP5.64□□□□□ -1.518e-8■□□□□ 9
SF1-217ENST00000486960 DDX39BQ13838 428 aaKnown RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 UGT8Q16880 541 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 PRSS53Q2L4Q9 553 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 SLC5A9Q2M3M2 681 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 HFEQ30201 348 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 WIPI1Q5MNZ9 446 aaPredicted RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 ANXA8L1Q5VT79 327 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 CWF19L1Q69YN2 538 aaKnown RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 TMEM214Q6NUQ4 689 aaKnown RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 OGFOD3Q6PK18 319 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 METAP1DQ6UB28 335 aaPredicted RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 RSPO2Q6UXX9 243 aaPredicted RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 PLPPR4Q7Z2D5 763 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 KCNK18Q7Z418 384 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 PDZD3Q86UT5 571 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 DNAAF5Q86Y56 855 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 ARHGEF39Q8N4T4 335 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 TMEM199Q8N511 208 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 ARFGAP2Q8N6H7 521 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 POU5F2Q8N7G0 328 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 DNAAF3Q8N9W5 541 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 OR13H1Q8NG92 308 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 PCDH19Q8TAB3 1148 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 NPLOC4Q8TAT6 608 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.64□□□□□ -1.51
SF1-217ENST00000486960 METTL6Q8TCB7 284 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 STK35Q8TDR2 534 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 CSGALNACT1Q8TDX6 532 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 DNAAF4Q8WXU2 420 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 NCSTNQ92542 709 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 INPP5DQ92835 1189 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 PEX13Q92968 403 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 TNPO1Q92973 898 aaKnown RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 PABPC5Q96DU9 382 aaKnown RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 ALG14Q96F25 216 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 C1orf159Q96HA4 380 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 GCNAQ96QF7 691 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 PSKH2Q96QS6 385 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 GAL3ST4Q96RP7 486 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 SMC6Q96SB8 1091 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 AGAP2Q99490 1192 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 POP1Q99575 1024 aaKnown RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 ELF4Q99607 663 aaPredicted RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 MEIS3Q99687 375 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 SH3GL3Q99963 347 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 NUP85Q9BW27 656 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 TWSG1Q9GZX9 223 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 COA1Q9GZY4 146 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 USP44Q9H0E7 712 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 WNT8AQ9H1J5 351 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 PABPC3Q9H361 631 aaKnown RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 LRRC40Q9H9A6 602 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 CENPMQ9NSP4 180 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 TMEM184CQ9NVA4 438 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 POLR3BQ9NW08 1133 aaPredicted RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 SOHLH2Q9NX45 425 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.64□□□□□ -1.51
SF1-217ENST00000486960 EHD3Q9NZN3 535 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 AFF4Q9UHB7 1163 aaKnown RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 CORO1CQ9ULV4 474 aaPredicted RBP5.64□□□□□ -1.51
SF1-217ENST00000486960 BTBD3Q9Y2F9 522 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 CBY1Q9Y3M2 126 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 PCDHGA5Q9Y5G8 931 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 PTPRQQ9UMZ3 2332 aa5.64□□□□□ -1.51
SF1-217ENST00000486960 KPNA7A9QM74 516 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 DVL2O14641 736 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 RASGRF2O14827 1237 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 PPEF2O14830 753 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 HNRNPRO43390 633 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 VEGFDO43915 354 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 IDH1O75874 414 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 SCAF4O95104 1147 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 PRAMEF12O95522 483 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ECDO95905 644 aaPredicted RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 ADH1BP00325 375 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 IL1AP01583 271 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ANXA2P07355 339 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 CNPP09543 421 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 EDNRBP24530 442 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 CD40P25942 277 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 RPA1P27694 616 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 TTKP33981 857 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 RFC2P35250 354 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 BMPR1AP36894 532 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 MRPS9P82933 396 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 ATP8B2P98198 1209 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 TBL3Q12788 808 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 IL24Q13007 206 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 CLN3Q13286 438 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 GNA13Q14344 377 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 VEPH1Q14D04 833 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 STK38Q15208 465 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ZMYND11Q15326 602 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 CYP2A13Q16696 494 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 DGKDQ16760 1214 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms