RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 PEBP4Q96S96 227 aa16.09■□□□□ 0.17
GARNL3-215ENST00000478702 DNAJC7Q99615 494 aa16.09■□□□□ 0.17
GARNL3-215ENST00000478702 EPAS1Q99814 870 aa16.09■□□□□ 0.17
GARNL3-215ENST00000478702 PRORYQ9H606 182 aa16.09■□□□□ 0.17
GARNL3-215ENST00000478702 MRPL47Q9HD33 250 aaKnown RBP16.09■□□□□ 0.17
GARNL3-215ENST00000478702 ANKRD36A6QL64 1941 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 CXorf51AA0A1B0GTR3 108 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 SMAD6O43541 496 aaKnown RBP16.08■□□□□ 0.16
GARNL3-215ENST00000478702 RNASEH2AO75792 299 aaKnown RBP16.08■□□□□ 0.16
GARNL3-215ENST00000478702 IL1BP01584 269 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 EPHA8P29322 1005 aaPredicted RBP16.08■□□□□ 0.16
GARNL3-215ENST00000478702 EPHB2P29323 1055 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 HTR7P34969 479 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 DRD3P35462 400 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 TARDBPQ13148 414 aaKnown RBP eCLIP16.08■□□□□ 0.16
GARNL3-215ENST00000478702 HES3Q5TGS1 186 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 RETSATQ6NUM9 610 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 LINGO4Q6UY18 593 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 CYP4V2Q6ZWL3 525 aaPredicted RBP16.08■□□□□ 0.16
GARNL3-215ENST00000478702 KANSL1Q7Z3B3 1105 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 ARFGAP1Q8N6T3 406 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 ATP11CQ8NB49 1132 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 ARHGEF2Q92974 986 aaKnown RBP16.08■□□□□ 0.16
GARNL3-215ENST00000478702 FAM131CQ96AQ9 280 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 SPON2Q9BUD6 331 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 SNRNP25Q9BV90 132 aaKnown RBP16.08■□□□□ 0.16
GARNL3-215ENST00000478702 CEP44Q9C0F1 390 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 THAP2Q9H0W7 228 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 MAGEH1Q9H213 219 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 AASDHPPTQ9NRN7 309 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 GPATCH2LQ9NWQ4 482 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 MYO1AQ9UBC5 1043 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 DNAI1Q9UI46 699 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 AP4E1Q9UPM8 1137 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 RAI2Q9Y5P3 530 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 KALRNO60229 2985 aa16.08■□□□□ 0.16
GARNL3-215ENST00000478702 COL27A1Q8IZC6 1860 aaPredicted RBP16.08■□□□□ 0.16
GARNL3-215ENST00000478702 LRRC72A6NJI9 287 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 EIF3CLB5ME19 914 aaKnown RBP16.07■□□□□ 0.16
GARNL3-215ENST00000478702 C1QTNF3-AMACRE9PGA6 284 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 MCF2LO15068 1137 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 FGF10O15520 208 aaPredicted RBP16.07■□□□□ 0.16
GARNL3-215ENST00000478702 CREB3O43889 395 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 RAMP2O60895 175 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 LRCH4O75427 683 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 RNF8O76064 485 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 C1SP09871 688 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 HNF1BP35680 557 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 ACVRL1P37023 503 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 CCR5P51681 352 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 METAP1P53582 386 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 ADPRHP54922 357 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 NXPH1P58417 271 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 PPP2CBP62714 309 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 PPP2CAP67775 309 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 SEMG2Q02383 582 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 RTP5Q14D33 572 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 ALKBH5Q6P6C2 394 aaKnown RBP16.07■□□□□ 0.16
GARNL3-215ENST00000478702 SPATS2Q86XZ4 545 aaKnown RBP16.07■□□□□ 0.16
GARNL3-215ENST00000478702 OR2A12Q8NGT7 310 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 SLC39A7Q92504 469 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 CCDC114Q96M63 670 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 EIF3CQ99613 913 aaKnown RBP16.07■□□□□ 0.16
GARNL3-215ENST00000478702 OMDQ99983 421 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 NOL6Q9H6R4 1146 aaKnown RBP16.07■□□□□ 0.16
GARNL3-215ENST00000478702 GDF3Q9NR23 364 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 SARDHQ9UL12 918 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 PPM1HQ9ULR3 514 aa16.07■□□□□ 0.16
GARNL3-215ENST00000478702 FLNBO75369 2602 aaKnown RBP16.06■□□□□ 0.16
GARNL3-215ENST00000478702 WASH4PA8MWX3 477 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 ATXN7O15265 892 aaPredicted RBP16.06■□□□□ 0.16
GARNL3-215ENST00000478702 BNIP3LO60238 219 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 MFAP3LO75121 409 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 CYP1A2P05177 515 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 CTSLP07711 333 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 GOT1P17174 413 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 MIPP30301 263 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 TPI1P60174 286 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 SLC20A2Q08357 652 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 CA9Q16790 459 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 FAM46CQ5VWP2 391 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 SARM1Q6SZW1 724 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 PCDH20Q8N6Y1 951 aaKnown RBP16.06■□□□□ 0.16
GARNL3-215ENST00000478702 SKA1Q96BD8 255 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 NCAPGQ9BPX3 1015 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 NRSN2Q9GZP1 204 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 DHX35Q9H5Z1 703 aaKnown RBP16.06■□□□□ 0.16
GARNL3-215ENST00000478702 CATSPERBQ9H7T0 1116 aa16.06■□□□□ 0.16
GARNL3-215ENST00000478702 MGAQ8IWI9 3026 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 CFAP46Q8IYW2 2715 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 TLR4O00206 839 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 YKT6O15498 198 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 SLC7A4O43246 635 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 LATO43561 262 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 PRPSAP2O60256 369 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 ZNF821O75541 412 aaPredicted RBP16.05■□□□□ 0.16
GARNL3-215ENST00000478702 CD160O95971 181 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 CDK4P11802 303 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 PCK1P35558 622 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 EIF4A3P38919 411 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms