RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	DENND1B	Q6P3S1	775 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	C22orf39	Q6P5X5	142 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	PHACTR4	Q8IZ21	702 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	PPM1K	Q8N3J5	372 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	HTR3C	Q8WXA8	447 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	KAT5	Q92993	513 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	SLC35C1	Q96A29	364 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	PPP1R13B	Q96KQ4	1090 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	TMEM74	Q96NL1	305 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	SLC13A1	Q9BZW2	595 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	CLPB	Q9H078	707 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	ADNP	Q9H2P0	1102 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	COX16	Q9P0S2	106 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	GULP1	Q9UBP9	304 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	PISD	Q9UG56	409 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	RABGEF1	Q9UJ41	708 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	PCDHB11	Q9Y5F2	797 aa		10.79	□□□□□ -0.68
APTX-222	ENST00000478279	ICE1	Q9Y2F5	2266 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279		A0A1W2PQM1	296 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279		M0QYT0	321 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	TSPAN6	O43657	245 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	ZNF821	O75541	412 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	CNTN5	O94779	1100 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	F13A1	P00488	732 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	ZSCAN22	P10073	491 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	WT1	P19544	449 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	NOS2	P35228	1153 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	GGCX	P38435	758 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	SYK	P43405	635 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	FMO5	P49326	533 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	YPEL5	P62699	121 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	FOXK1	P85037	733 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	FKBP3	Q00688	224 aa	Known RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	MEA1	Q16626	185 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	C4orf17	Q53FE4	359 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	FAXC	Q5TGI0	409 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	LVRN	Q6Q4G3	990 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	LINGO4	Q6UY18	593 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	PARS2	Q7L3T8	475 aa	Known RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	ZFAND4	Q86XD8	727 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	DTX1	Q86Y01	620 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	PTRH1	Q86Y79	214 aa	Known RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	DEFB106A	Q8N104	65 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	SDR16C5	Q8N3Y7	309 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	FSTL5	Q8N475	847 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	ARL10	Q8N8L6	244 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	DCAF4L2	Q8NA75	395 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	SCG3	Q8WXD2	468 aa	Known RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	CCDC74A	Q96AQ1	378 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	TMEM159	Q96B96	161 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	SLC2A13	Q96QE2	648 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	HEPH	Q9BQS7	1158 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	FUCA2	Q9BTY2	467 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	CPEB1	Q9BZB8	566 aa	Known RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	EPN3	Q9H201	632 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	METTL14	Q9HCE5	456 aa	Known RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	ARMCX3	Q9UH62	379 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	PNMA8B	Q9ULN7	279 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-222	ENST00000478279	MAN2B2	Q9Y2E5	1009 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279	LOXL2	Q9Y4K0	774 aa		10.78	□□□□□ -0.68
APTX-222	ENST00000478279		A0A0D9SEW6	157 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	PRAMEF33	A0A0G2JMD5	474 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279		A0A1W2PQ27	194 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279		A0A1W2PQ64	194 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279		A0A1W2PQC6	194 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279		K7ELQ4	463 aa	Predicted RBP	10.77	□□□□□ -0.69
APTX-222	ENST00000478279	PMM2	O15305	246 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	PRAMEF10	O60809	474 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	PAGE1	O75459	146 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	ENDOD1	O94919	500 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	RPLP0	P05388	317 aa	Known RBP	10.77	□□□□□ -0.69
APTX-222	ENST00000478279	GLI1	P08151	1106 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	ITIH1	P19827	911 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	CD82	P27701	267 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	BLK	P51451	505 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	PPARD	Q03181	441 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	DNM1	Q05193	864 aa	Known RBP	10.77	□□□□□ -0.69
APTX-222	ENST00000478279	SLC20A2	Q08357	652 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	IGFBP7	Q16270	282 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	SKIDA1	Q1XH10	827 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	ALF	Q53S48	1182 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	CARD16	Q5EG05	197 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	RRAGA	Q7L523	313 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	SETD3	Q86TU7	594 aa	Predicted RBP	10.77	□□□□□ -0.69
APTX-222	ENST00000478279	KY	Q8NBH2	561 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	OR6C4	Q8NGE1	309 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	RAB7B	Q96AH8	199 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	CENPT	Q96BT3	561 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	PSMG3-AS1	Q96PY0	264 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	TSG101	Q99816	390 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	CEP44	Q9C0F1	390 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	SIK2	Q9H0K1	926 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	LRRN3	Q9H3W5	708 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	DOLK	Q9UPQ8	538 aa		10.77	□□□□□ -0.69
APTX-222	ENST00000478279	ZFC3H1	O60293	1989 aa	Known RBP	10.77	□□□□□ -0.69
APTX-222	ENST00000478279	FAM237A	A0A1B0GTK4	181 aa		10.76	□□□□□ -0.69
APTX-222	ENST00000478279	C16orf96	A6NNT2	1141 aa		10.76	□□□□□ -0.69
APTX-222	ENST00000478279	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms