RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 KCTD2Q14681 263 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 ELF2Q15723 593 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 SYCP2LQ5T4T6 812 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 ANO7Q6IWH7 933 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 MSANTD2Q6P1R3 559 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 ACSM6Q6P461 480 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 TFAP2DQ7Z6R9 452 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 SYTL1Q8IYJ3 562 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 ACRBPQ8NEB7 543 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 PRSS3P2Q8NHM4 247 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 NEK9Q8TD19 979 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 IPO4Q8TEX9 1081 aaKnown RBP5.16□□□□□ -1.58
VPS50-214ENST00000477935 SCARB1Q8WTV0 552 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 AKAP1Q92667 903 aaKnown RBP eCLIP5.16□□□□□ -1.58
VPS50-214ENST00000477935 VPS16Q9H269 839 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 EPS8L2Q9H6S3 715 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 TUBA8Q9NY65 449 aaPredicted RBP5.16□□□□□ -1.58
VPS50-214ENST00000477935 PI4KBQ9UBF8 816 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 CTNNA3Q9UI47 895 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 CDC23Q9UJX2 597 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 HEMK1Q9Y5R4 338 aaPredicted RBP5.16□□□□□ -1.58
VPS50-214ENST00000477935 SIRT4Q9Y6E7 314 aaPredicted RBP5.16□□□□□ -1.58
VPS50-214ENST00000477935 LRRC37A2A6NM11 1700 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 DNAH14Q0VDD8 3507 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 KIF16BQ96L93 1317 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 CLSPNQ9HAW4 1339 aa5.16□□□□□ -1.58
VPS50-214ENST00000477935 CFAP47Q6ZTR5 3102 aa5.15□□□□□ -1.58
VPS50-214ENST00000477935 PNMA6EA0A0J9YXQ4 647 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 A0A0U1RQG5 324 aaPredicted RBP5.15□□□□□ -1.59
VPS50-214ENST00000477935 MED19A0JLT2 244 aaPredicted RBP5.15□□□□□ -1.59
VPS50-214ENST00000477935 TMEM221A6NGB7 291 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 DDTLA6NHG4 134 aaPredicted RBP5.15□□□□□ -1.59
VPS50-214ENST00000477935 TTC34A8MYJ7 566 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 M0QZQ0 153 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 M0R296 226 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 PRYO14603 147 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 ADAM10O14672 748 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 INPPL1O15357 1258 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 PGK1P00558 417 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 SLC3A2P08195 630 aaKnown RBP5.15□□□□□ -1.59
VPS50-214ENST00000477935 ITGA5P08648 1049 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 ACTN1P12814 892 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 AKR1A1P14550 325 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 NDUFS1P28331 727 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 THBS4P35443 961 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 HOXD12P35452 270 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 PPM1AP35813 382 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 NBL1P41271 181 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 CSHL1Q14406 222 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 STARD3Q14849 445 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 ASCL5Q7RTU5 278 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 TTC30AQ86WT1 665 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 KLHDC9Q8NEP7 349 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 LINS1Q8NG48 757 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 OR52L2PQ8NGH6 319 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 GLMPQ8WWB7 406 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 CUL5Q93034 780 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 MUL1Q969V5 352 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 FCRL5Q96RD9 977 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 SIGLEC11Q96RL6 698 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 FSD1Q9BTV5 496 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 TM2D2Q9BX73 214 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 SPRTNQ9H040 489 aaPredicted RBP5.15□□□□□ -1.59
VPS50-214ENST00000477935 ZNF700Q9H0M5 742 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 CDCP1Q9H5V8 836 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 ARFGAP3Q9NP61 516 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 ASNSD1Q9NWL6 643 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 TRNAU1APQ9NX07 287 aaKnown RBP5.15□□□□□ -1.59
VPS50-214ENST00000477935 IGSF9Q9P2J2 1179 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 HERC5Q9UII4 1024 aaKnown RBP5.15□□□□□ -1.59
VPS50-214ENST00000477935 PLXNB2O15031 1838 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 TRIOO75962 3097 aa5.15□□□□□ -1.59
VPS50-214ENST00000477935 EPOPA6NHQ4 379 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 NPC1O15118 1278 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 MOSPD3O75425 235 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 CD4P01730 458 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 IFIT1P09914 478 aaKnown RBP5.14□□□□□ -1.59
VPS50-214ENST00000477935 HOXD9P28356 352 aaPredicted RBP5.14□□□□□ -1.59
VPS50-214ENST00000477935 AVPR2P30518 371 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 IDUAP35475 653 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 VPS41P49754 854 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 ZNF91Q05481 1191 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 GRM4Q14833 912 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 PRAMEF19Q5SWL8 479 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 PAPD7Q5XG87 772 aaKnown RBP5.14□□□□□ -1.59
VPS50-214ENST00000477935 C16orf89Q6UX73 402 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 KYAT3Q6YP21 454 aaKnown RBP5.14□□□□□ -1.59
VPS50-214ENST00000477935 IGFBPL1Q8WX77 278 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 P2RY11Q96G91 374 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 TMEM41AQ96HV5 264 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 C12orf42Q96LP6 360 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 PAAF1Q9BRP4 392 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 TTLL2Q9BWV7 592 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 HIPK3Q9H422 1215 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 MROH8Q9H579 483 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 AGO4Q9HCK5 861 aaKnown RBP5.14□□□□□ -1.59
VPS50-214ENST00000477935 MLXIPLQ9NP71 852 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 TMEM184CQ9NVA4 438 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 HOXC10Q9NYD6 342 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms