RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 USP25Q9UHP3 1055 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 SLC25A13Q9UJS0 675 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 ATXN7L1Q9ULK2 861 aaPredicted RBP9.97□□□□□ -0.81
COL4A5-204ENST00000477429 CNTN6Q9UQ52 1028 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 HS3ST3A1Q9Y663 406 aa9.97□□□□□ -0.81
COL4A5-204ENST00000477429 TRPM6Q9BX84 2022 aa9.96□□□□□ -0.81
COL4A5-204ENST00000477429 A0A1W2PQM1 296 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 YY2O15391 372 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 SLC16A3O15427 465 aaKnown RBP9.96□□□□□ -0.82
COL4A5-204ENST00000477429 ZMPSTE24O75844 475 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 ADRB3P13945 408 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 ITIH1P19827 911 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 TBXAS1P24557 533 aaPredicted RBP9.96□□□□□ -0.82
COL4A5-204ENST00000477429 UGT1A5P35504 534 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 IGFALSP35858 605 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 PFN3P60673 137 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 YWHAEP62258 255 aaKnown RBP9.96□□□□□ -0.82
COL4A5-204ENST00000477429 NR0B2Q15466 257 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 TBR1Q16650 682 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 HS1BP3Q53T59 392 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 LRRC73Q5JTD7 316 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 RABGAP1LQ5R372 815 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 C22orf39Q6P5X5 142 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 GJB7Q6PEY0 223 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 TMPRSS9Q7Z410 1059 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 PARGQ86W56 976 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 WDR36Q8NI36 951 aaKnown RBP9.96□□□□□ -0.82
COL4A5-204ENST00000477429 NT5C1BQ96P26 610 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 DUSP23Q9BVJ7 150 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 C1QTNF2Q9BXJ5 285 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 SCAND2PQ9GZW5 306 aaPredicted RBP9.96□□□□□ -0.82
COL4A5-204ENST00000477429 SIK2Q9H0K1 926 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 SYNDIG1Q9H7V2 258 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 USP29Q9HBJ7 922 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 MBNL1Q9NR56 388 aaKnown RBP9.96□□□□□ -0.82
COL4A5-204ENST00000477429 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.96□□□□□ -0.82
COL4A5-204ENST00000477429 MPP6Q9NZW5 540 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 FOXJ2Q9P0K8 574 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 ARMCX3Q9UH62 379 aaPredicted RBP9.96□□□□□ -0.82
COL4A5-204ENST00000477429 SALL4Q9UJQ4 1053 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 MAN2B2Q9Y2E5 1009 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 FCF1Q9Y324 198 aaKnown RBP9.96□□□□□ -0.82
COL4A5-204ENST00000477429 CSNK1G3Q9Y6M4 447 aa9.96□□□□□ -0.82
COL4A5-204ENST00000477429 ABCA2Q9BZC7 2435 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 HIVEP1P15822 2718 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 CCDC187A0A096LP49 1063 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 NEMP2A6NFY4 417 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 BECN2A8MW95 431 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 ZNF202O95125 648 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 LETM1O95202 739 aaPredicted RBP9.95□□□□□ -0.82
COL4A5-204ENST00000477429 ERBB2P04626 1255 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 ITGA2BP08514 1039 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 CCL7P80098 99 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 ARF5P84085 180 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 NME3Q13232 169 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 PDCLQ13371 301 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 RAB6CQ53S08 254 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 FAM183BPQ6ZVS7 135 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 TFAP2DQ7Z6R9 452 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 ZFAND4Q86XD8 727 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 PASD1Q8IV76 773 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 PHACTR4Q8IZ21 702 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 KYQ8NBH2 561 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 NETO2Q8NC67 525 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 OR6K2Q8NGY2 324 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 ZNF606Q8WXB4 792 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 CCDC74AQ96AQ1 378 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 FUCA2Q9BTY2 467 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 RAB6CQ9H0N0 254 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 MUC3BQ9H195 1237 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 THAP9Q9H5L6 903 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 GDPD2Q9HCC8 539 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 METTL14Q9HCE5 456 aaKnown RBP9.95□□□□□ -0.82
COL4A5-204ENST00000477429 EPB41L5Q9HCM4 733 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 PIGVQ9NUD9 493 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 IL36AQ9UHA7 158 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 AJAP1Q9UKB5 411 aaPredicted RBP9.95□□□□□ -0.82
COL4A5-204ENST00000477429 CFAP45Q9UL16 551 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 PCDHGA4Q9Y5G9 962 aa9.95□□□□□ -0.82
COL4A5-204ENST00000477429 HEMK1Q9Y5R4 338 aaPredicted RBP9.95□□□□□ -0.82
COL4A5-204ENST00000477429 PRAMEF33A0A0G2JMD5 474 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 CLEC18AA5D8T8 446 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 PLD2O14939 933 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 PRAMEF10O60809 474 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 CLDN11O75508 207 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 TCEA3O75764 348 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 RHOCP08134 193 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 TSHRP16473 764 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 CCR1P32246 355 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 ARSDP51689 593 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 NEK3P51956 506 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 RPS21P63220 83 aaKnown RBP9.94□□□□□ -0.82
COL4A5-204ENST00000477429 FKBP3Q00688 224 aaKnown RBP9.94□□□□□ -0.82
COL4A5-204ENST00000477429 TLE1Q04724 770 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 IGFBP7Q16270 282 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 PRRT3Q5FWE3 981 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 TTC39BQ5VTQ0 682 aaPredicted RBP9.94□□□□□ -0.82
COL4A5-204ENST00000477429 ATL3Q6DD88 541 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 ISM2Q6H9L7 571 aa9.94□□□□□ -0.82
COL4A5-204ENST00000477429 TRNP1Q6NT89 227 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms