RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 TBC1D3GQ6DHY5 549 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TBC1D3CQ6IPX1 549 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 ZNF530Q6P9A1 599 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-215ENST00000476664 PIK3AP1Q6ZUJ8 805 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 RHPN2Q8IUC4 686 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TBC1D3Q8IZP1 549 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-215ENST00000476664 SUPT20HQ8NEM7 779 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TBC1D15Q8TC07 691 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 SPATA18Q8TC71 538 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 DUSP19Q8WTR2 217 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 OVCA2Q8WZ82 227 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 C16orf45Q96MC5 204 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TMEM237Q96Q45 408 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 SLC32A1Q9H598 525 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 DDX43Q9NXZ2 648 aaKnown RBP7.13□□□□□ -1.27
LRCH3-215ENST00000476664 FAM184BQ9ULE4 1060 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 HCFC2Q9Y5Z7 792 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 RAD54BQ9Y620 910 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 FAM205AQ6ZU69 1335 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 ARHGEF37A1IGU5 675 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 KRT87PA6NCN2 255 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 URADA6NGE7 173 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 AGAP5A6NIR3 686 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 B5MCH6 92 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 GSC2O15499 205 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 CTIFO43310 598 aaKnown RBP7.12□□□□□ -1.27
LRCH3-215ENST00000476664 KINO60870 393 aaKnown RBP7.12□□□□□ -1.27
LRCH3-215ENST00000476664 CBFA2T3O75081 653 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 HPXP02790 462 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 FYNP06241 537 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 DLDP09622 509 aaKnown RBP7.12□□□□□ -1.27
LRCH3-215ENST00000476664 CYP2C8P10632 490 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 ZNF8P17098 575 aaPredicted RBP7.12□□□□□ -1.27
LRCH3-215ENST00000476664 RPS12P25398 132 aaKnown RBP7.12□□□□□ -1.27
LRCH3-215ENST00000476664 NTSR1P30989 418 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 HOXC8P31273 242 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 POLGP54098 1239 aaPredicted RBP7.12□□□□□ -1.27
LRCH3-215ENST00000476664 HMGN5P82970 282 aaKnown RBP7.12□□□□□ -1.27
LRCH3-215ENST00000476664 BNIP3Q12983 259 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 CBX3Q13185 183 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 SNTB1Q13884 538 aaKnown RBP7.12□□□□□ -1.27
LRCH3-215ENST00000476664 AAK1Q2M2I8 961 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 TYSND1Q2T9J0 566 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 COLEC12Q5KU26 742 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 CST9LP1Q5W188 147 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 WDR73Q6P4I2 378 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 TUSC5Q8IXB3 177 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 SLC35B2Q8TB61 432 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 RNFT2Q96EX2 444 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 BICD1Q96G01 975 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 CFAP57Q96MR6 1250 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 SSBP4Q9BWG4 385 aaPredicted RBP7.12□□□□□ -1.27
LRCH3-215ENST00000476664 C1orf21Q9H246 121 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 NRDE2Q9H7Z3 1164 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 PDE11AQ9HCR9 933 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 SIRT3Q9NTG7 399 aaPredicted RBP7.12□□□□□ -1.27
LRCH3-215ENST00000476664 ETAA1Q9NY74 926 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 TUBE1Q9UJT0 475 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 LIPT1Q9Y234 373 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 ADAM18Q9Y3Q7 739 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 PCDHB7Q9Y5E2 793 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 FPGT-TNNI3KV9GXZ4 949 aa7.12□□□□□ -1.27
LRCH3-215ENST00000476664 LAMB2P55268 1798 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 AOX1Q06278 1338 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 SYNJ2BP-COX16A0A087WUM0 186 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 CCDC187A0A096LP49 1063 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 TRBC2A0A5B9 178 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 PSMD10O75832 226 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 KNG1P01042 644 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 C8BP07358 591 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 EPHA3P29320 983 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 HOXA10P31260 410 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-215ENST00000476664 RFC1P35251 1148 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-215ENST00000476664 BMPR1AP36894 532 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 PRMT2P55345 433 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 EFNB1P98172 346 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 NIPAL4Q0D2K0 466 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 TOP3AQ13472 1001 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-215ENST00000476664 FHL3Q13643 280 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 ACOX1Q15067 660 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 PTCHD3Q3KNS1 767 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 GLRA4Q5JXX5 417 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 GKAP1Q5VSY0 366 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-215ENST00000476664 CCDC144NLQ6NUI1 221 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 CLEC9AQ6UXN8 241 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 ARMC9Q7Z3E5 817 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 CMTM4Q8IZR5 234 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 SVOPQ8N4V2 548 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 CTCFLQ8NI51 663 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-215ENST00000476664 FIBINQ8TAL6 211 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 MRPS27Q92552 414 aaKnown RBP7.11□□□□□ -1.27
LRCH3-215ENST00000476664 PPP1R13BQ96KQ4 1090 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 KLHL15Q96M94 604 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 NAA11Q9BSU3 229 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-215ENST00000476664 SPXQ9BT56 116 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 CLPBQ9H078 707 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 KCNK9Q9NPC2 374 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 MRPS18AQ9NVS2 196 aaKnown RBP7.11□□□□□ -1.27
LRCH3-215ENST00000476664 ANAPC2Q9UJX6 822 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 RAB21Q9UL25 225 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms