RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 WWP1Q9H0M0 922 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 FAM96AQ9H5X1 160 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 NT5MQ9NPB1 228 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 HEY2Q9UBP5 337 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 DNMT3LQ9UJW3 386 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 RIMKLBQ9ULI2 386 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 ANKRD36A6QL64 1941 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 CCDC195A0A1B0GUA6 201 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 CARNS1A5YM72 827 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 ZNF840PA6NDX5 716 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 TARM1B6A8C7 271 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 F5H5T6 163 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 H3BNC9 293 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 ITM2AO43736 263 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 PMPCBO75439 489 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 WFS1O76024 890 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 NEBLO76041 1014 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 ATP6V1G2O95670 118 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 EPOP01588 193 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 AHSGP02765 367 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 APOA4P06727 396 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 ATXN1LP0C7T5 689 aaKnown RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 CPA3P15088 417 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 TARSP26639 723 aaKnown RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 HOXD9P28356 352 aaPredicted RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 PTPN4P29074 926 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 SERPINB3P29508 390 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 SLC6A4P31645 630 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 OR1D2P34982 312 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 ATP5C1P36542 298 aaKnown RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 CHRNA4P43681 627 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 SLC1A6P48664 564 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 SERPINH1P50454 418 aaKnown RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 RASSF2P50749 326 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 PRKAA2P54646 552 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 CDH4P55283 916 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 DSG1Q02413 1049 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 DSC2Q02487 901 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 ILF2Q12905 390 aaKnown RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 TUBB3Q13509 450 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 LBRQ14739 615 aaKnown RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 POU6F1Q14863 301 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 POLD3Q15054 466 aaPredicted RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 TSTD2Q5T7W7 516 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 TMCO4Q5TGY1 634 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 ATG14Q6ZNE5 492 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 MTDHQ86UE4 582 aaKnown RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 C10orf107Q8IVU9 208 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 ARID3BQ8IVW6 561 aaPredicted RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 LMNTD2Q8IXW0 634 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 GPR65Q8IYL9 337 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 SLC39A11Q8N1S5 342 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 TMEM151AQ8N4L1 468 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 ACVR1CQ8NER5 493 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 PIWIL2Q8TC59 973 aaKnown RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 NSMCE1Q8WV22 266 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 RPRD1AQ96P16 312 aaPredicted RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 KLHL5Q96PQ7 755 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 RAB3IPQ96QF0 476 aaPredicted RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 MAGEH1Q9H213 219 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 ZNF395Q9H8N7 513 aaPredicted RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 CAB39LQ9H9S4 337 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 ZNF358Q9NW07 568 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 HAO1Q9UJM8 370 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 RPL26L1Q9UNX3 145 aaKnown RBP9.93□□□□□ -0.82
USP39-214ENST00000474572 TRIM33Q9UPN9 1127 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 YIPF1Q9Y548 306 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 PCDHB12Q9Y5F1 795 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 DENND4CQ5VZ89 1909 aa9.93□□□□□ -0.82
USP39-214ENST00000474572 MROH6A6NGR9 719 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 CAPN14A8MX76 684 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 TMEM114B3SHH9 223 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 FCHO1O14526 889 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 ZNF195O14628 629 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 H2AFYO75367 372 aaKnown RBP9.92□□□□□ -0.82
USP39-214ENST00000474572 VAPBO95292 243 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 GJB5O95377 273 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 SEC24AO95486 1093 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 CBX6O95503 412 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 LATS1O95835 1130 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 SBK3P0C264 359 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 SLC35E2BP0CK96 405 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 RALBP11234 206 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 HLA-DPA1P20036 260 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 KCNA4P22459 653 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 PSMA3P25788 255 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 ARRB2P32121 409 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 GMPRP36959 345 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 ACVRL1P37023 503 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 CD86P42081 329 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 SLC1A2P43004 574 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 PPP3CCP48454 512 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 ALDH7A1P49419 539 aaKnown RBP9.92□□□□□ -0.82
USP39-214ENST00000474572 KCNQ1P51787 676 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 ABCE1P61221 599 aaKnown RBP9.92□□□□□ -0.82
USP39-214ENST00000474572 MAXP61244 160 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 IRF9Q00978 393 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 TLE2Q04725 743 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 IKBKEQ14164 716 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 DLG2Q15700 870 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms