RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 MAD1L1Q9Y6D9 718 aa10.42□□□□□ -0.74
PRPF38A-202ENST00000474048 MYOFQ9NZM1 2061 aa10.42□□□□□ -0.74
PRPF38A-202ENST00000474048 TICRRQ7Z2Z1 1910 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 ANHXE9PGG2 379 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 INSIG1O15503 277 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 DLDP09622 509 aaKnown RBP10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 MYBL2P10244 700 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 MLNP12872 115 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 H2AFXP16104 143 aaPredicted RBP10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 IVDP26440 423 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 SERPINA4P29622 427 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 GJA4P35212 333 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 GRIA2P42262 883 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 MAGEA6P43360 314 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 SESN2P58004 480 aaPredicted RBP10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 DSC2Q02487 901 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 BCL2L1Q07817 233 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 LAMB3Q13751 1172 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 TRADDQ15628 312 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 SMAD2Q15796 467 aaKnown RBP10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 SLC14A2Q15849 920 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 ARTNQ5T4W7 220 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 ANKRD22Q5VYY1 191 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 RNF43Q68DV7 783 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 SDE2Q6IQ49 451 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 LRRC8BQ6P9F7 803 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 ZDHHC24Q6UX98 284 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 TRMT10CQ7L0Y3 403 aaKnown RBP10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 TMC3Q7Z5M5 1100 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 CCNJLQ8IV13 435 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 SH2D3CQ8N5H7 860 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 TERB1Q8NA31 727 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 TSEN2Q8NCE0 465 aaKnown RBP10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 PPHLN1Q8NEY8 458 aaKnown RBP10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 GABPB2Q8TAK5 448 aaPredicted RBP10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 AENQ8WTP8 325 aaKnown RBP10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 RMDN1Q96DB5 314 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 LRRC39Q96DD0 335 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 IMP4Q96G21 291 aaKnown RBP10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 MSANTD3Q96H12 275 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 SERPINB12Q96P63 405 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 NUDCD1Q96RS6 583 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 P2RY13Q9BPV8 354 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 NAT9Q9BTE0 207 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 PLA2G2FQ9BZM2 168 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 VPS37BQ9H9H4 285 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 HPS4Q9NQG7 708 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 LIMD1Q9UGP4 676 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 CLEC4EQ9ULY5 219 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 ERVW-1Q9UQF0 538 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 HS3ST2Q9Y278 367 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 SSUH2Q9Y2M2 353 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 OR51B4Q9Y5P0 310 aa10.41□□□□□ -0.74
PRPF38A-202ENST00000474048 KIAA1549LQ6ZVL6 1849 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 RANBP2P49792 3224 aaKnown RBP10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 SPAG6O75602 509 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 ZMPSTE24O75844 475 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 TMEM63AO94886 807 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 KAT7O95251 611 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 PEX11BO96011 259 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 MT-CYBP00156 380 aaPredicted RBP10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 GSRP00390 522 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 IVLP07476 585 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 SRCP12931 536 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 HLA-DPA1P20036 260 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 XPAP23025 273 aaPredicted RBP10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 CD68P34810 354 aaPredicted RBP10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 MAGEA4P43358 317 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 NPY2RP49146 381 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 STK19P49842 368 aaPredicted RBP10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 WNT3AP56704 352 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 NSUN2Q08J23 767 aaKnown RBP eCLIP10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 SEPT6Q14141 434 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 SPARCL1Q14515 664 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 GEN1Q17RS7 908 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 CCDC38Q502W7 563 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 SPDYCQ5MJ68 293 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 SERPINA13PQ6UXR4 307 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 KDELC2Q7Z4H8 507 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 DSG4Q86SJ6 1040 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 SRLQ86TD4 932 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 RNF135Q8IUD6 432 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 ETFBKMTQ8IXQ9 262 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 CNTD1Q8N815 330 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 OR2AP1Q8NGE2 309 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 SPATA22Q8NHS9 363 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 ANKRD7Q92527 254 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 TTC17Q96AE7 1141 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 ISG20Q96AZ6 181 aaKnown RBP10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 ALG14Q96F25 216 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 NEUROG2Q9H2A3 272 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 TNKS2Q9H2K2 1166 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 ZDHHC6Q9H6R6 413 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 KCNK12Q9HB15 430 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 ELOVL2Q9NXB9 296 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 CHMP2BQ9UQN3 213 aa10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 ARIH1Q9Y4X5 557 aaPredicted RBP10.4□□□□□ -0.74
PRPF38A-202ENST00000474048 A0A1W2PQ67 120 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 SDR42E2A6NKP2 422 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 BHMG1C9JSJ3 638 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms