RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 JRKLQ9Y4A0 524 aa11.81□□□□□ -0.52
HLA-C-206ENST00000470363 HS3ST4Q9Y661 456 aa11.81□□□□□ -0.52
HLA-C-206ENST00000470363 FAM47DPA6NHR8 397 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 LRRC72A6NJI9 287 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 DDX3YO15523 660 aaKnown RBP11.8□□□□□ -0.52
HLA-C-206ENST00000470363 LRCH4O75427 683 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 RNF8O76064 485 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 URI1O94763 535 aaPredicted RBP11.8□□□□□ -0.52
HLA-C-206ENST00000470363 ADH1BP00325 375 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 TUBB4AP04350 444 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 GRK6P43250 576 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 CXCR3P49682 368 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 CCT8P50990 548 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 HDAC4P56524 1084 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 SFSWAPQ12872 951 aaKnown RBP11.8□□□□□ -0.52
HLA-C-206ENST00000470363 NME3Q13232 169 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 SMAD1Q15797 465 aaKnown RBP11.8□□□□□ -0.52
HLA-C-206ENST00000470363 SCYL2Q6P3W7 929 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 SND1Q7KZF4 910 aaKnown RBP eCLIP11.8□□□□□ -0.529e-14■■■■□ 23.4
HLA-C-206ENST00000470363 MARCH9Q86YJ5 346 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 NIPA2Q8N8Q9 360 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 SAP25Q8TEE9 199 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 CENPIQ92674 756 aaPredicted RBP11.8□□□□□ -0.52
HLA-C-206ENST00000470363 PGAP3Q96FM1 320 aaPredicted RBP11.8□□□□□ -0.52
HLA-C-206ENST00000470363 HES6Q96HZ4 224 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 PEBP4Q96S96 227 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 ELF4Q99607 663 aaPredicted RBP11.8□□□□□ -0.52
HLA-C-206ENST00000470363 OMDQ99983 421 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 PIGVQ9NUD9 493 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 KLHL11Q9NVR0 708 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 ARHGEF38Q9NXL2 777 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 SLC12A6Q9UHW9 1150 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 GPSM3Q9Y4H4 160 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 CACNA1GO43497 2377 aa11.8□□□□□ -0.52
HLA-C-206ENST00000470363 DRGXA6NNA5 263 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 MCF2LO15068 1137 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 ZNF185O15231 689 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 PLRG1O43660 514 aaKnown RBP11.79□□□□□ -0.52
HLA-C-206ENST00000470363 PAGE1O75459 146 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 MT-CO1P00395 513 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 HOXB3P14651 431 aaPredicted RBP11.79□□□□□ -0.52
HLA-C-206ENST00000470363 CTNNA2P26232 953 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 IL1R2P27930 398 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 CD38P28907 300 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 SLC1A1P43005 524 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 PSMD8P48556 350 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 NUMBP49757 651 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 OXCT1P55809 520 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 NXPH1P58417 271 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 PPP2CBP62714 309 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 PPP2CAP67775 309 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 SLC25A11Q02978 314 aaKnown RBP11.79□□□□□ -0.52
HLA-C-206ENST00000470363 ZNF211Q13398 564 aaPredicted RBP11.79□□□□□ -0.52
HLA-C-206ENST00000470363 LLGL1Q15334 1064 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 SMTNL2Q2TAL5 461 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 SLC25A52Q3SY17 297 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 RABGAP1LQ5R372 815 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 PAPD7Q5XG87 772 aaKnown RBP11.79□□□□□ -0.52
HLA-C-206ENST00000470363 AADACL2Q6P093 401 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 KANSL1Q7Z3B3 1105 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 SPATS2Q86XZ4 545 aaKnown RBP11.79□□□□□ -0.52
HLA-C-206ENST00000470363 CCDC117Q8IWD4 279 aaPredicted RBP11.79□□□□□ -0.52
HLA-C-206ENST00000470363 OR14C36Q8NHC7 312 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 GANCQ8TET4 914 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 COG1Q8WTW3 980 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 ALG3Q92685 438 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 ACE2Q9BYF1 805 aaPredicted RBP11.79□□□□□ -0.52
HLA-C-206ENST00000470363 MAGEB5Q9BZ81 275 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 KDM4CQ9H3R0 1056 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 FAM204AQ9H8W3 233 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 ERVMER34-1Q9H9K5 563 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 TMPRSS4Q9NRS4 437 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 GPATCH2LQ9NWQ4 482 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 ZNF212Q9UDV6 495 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 VANGL2Q9ULK5 521 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 TPX2Q9ULW0 747 aaKnown RBP11.79□□□□□ -0.52
HLA-C-206ENST00000470363 STAP1Q9ULZ2 295 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 SNX12Q9UMY4 172 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 PTPRBP23467 1997 aa11.79□□□□□ -0.52
HLA-C-206ENST00000470363 APC2O95996 2303 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 IGLV3-10A0A075B6K4 115 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 TLR4O00206 839 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 RNF103O00237 685 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 PLK4O00444 970 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 CLDN11O75508 207 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 CNTN5O94779 1100 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 ENDOD1O94919 500 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 IL1BP01584 269 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 RARAP10276 462 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 CTNNA1P35221 906 aaKnown RBP11.78□□□□□ -0.52
HLA-C-206ENST00000470363 GGCXP38435 758 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 RXRGP48443 463 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 PEX5P50542 639 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 CDH4P55283 916 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 TAS2R38P59533 333 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 IL9RQ01113 521 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 DEUP1Q05D60 604 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 MTA1Q13330 715 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 ACAP1Q15027 740 aa11.78□□□□□ -0.52
HLA-C-206ENST00000470363 DLG2Q15700 870 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms