RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 SCNN1AP37088 669 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 DPP6P42658 865 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 CXCR3P49682 368 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 EIF3BP55884 814 aaKnown RBP17.98■□□□□ 0.47
MRPL28-208ENST00000469744 RPL7AP62424 266 aaKnown RBP17.98■□□□□ 0.47
MRPL28-208ENST00000469744 ECT2LQ008S8 904 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 ZNF252P-AS1Q0IIN9 211 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 UAP1Q16222 522 aaPredicted RBP17.98■□□□□ 0.47
MRPL28-208ENST00000469744 HNRNPA1L2Q32P51 320 aaKnown RBP17.98■□□□□ 0.47
MRPL28-208ENST00000469744 SLC25A52Q3SY17 297 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 SYCP2LQ5T4T6 812 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 TTC39BQ5VTQ0 682 aaPredicted RBP17.98■□□□□ 0.47
MRPL28-208ENST00000469744 EMC1Q8N766 993 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 ATL2Q8NHH9 583 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 FOXJ1Q92949 421 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 ART4Q93070 314 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 NT5C3BQ969T7 300 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 MCEEQ96PE7 176 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 MIR1-1HGQ9H1L0 117 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 WDCPQ9H6R7 721 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 RRN3Q9NYV6 651 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 SUN2Q9UH99 717 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 SLC6A14Q9UN76 642 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 EFR3BQ9Y2G0 817 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 SNX24Q9Y343 169 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 NFS1Q9Y697 457 aa17.98■□□□□ 0.47
MRPL28-208ENST00000469744 HMGB1P1B2RPK0 211 aaPredicted RBP17.97■□□□□ 0.47
MRPL28-208ENST00000469744 GJB6O95452 261 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 GAS8O95995 478 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 SERPINF2P08697 491 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 RPL21P46778 160 aaKnown RBP17.97■□□□□ 0.47
MRPL28-208ENST00000469744 GYS2P54840 703 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 CAV1Q03135 178 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 DHX9Q08211 1270 aaKnown RBP17.97■□□□□ 0.47
MRPL28-208ENST00000469744 PTK6Q13882 451 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 DAB2IPQ5VWQ8 1189 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 RNF219Q5W0B1 726 aaPredicted RBP17.97■□□□□ 0.47
MRPL28-208ENST00000469744 ZNF776Q68DI1 518 aaPredicted RBP17.97■□□□□ 0.47
MRPL28-208ENST00000469744 DRICH1Q6PGQ1 229 aaPredicted RBP17.97■□□□□ 0.47
MRPL28-208ENST00000469744 CEP76Q8TAP6 659 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 TSPYL1Q9H0U9 437 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 TMBIM4Q9HC24 238 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 CAPN10Q9HC96 672 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 ARHGEF38Q9NXL2 777 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 CHD8Q9HCK8 2581 aa17.97■□□□□ 0.47
MRPL28-208ENST00000469744 GOLGA6L10A6NI86 522 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 GIPC1O14908 333 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 CNTN5O94779 1100 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 DNTTP04053 509 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 SRPRAP08240 638 aaKnown RBP17.96■□□□□ 0.47
MRPL28-208ENST00000469744 KRT3P12035 628 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 VAV1P15498 845 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 ITIH2P19823 946 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 SKOR1P84550 965 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 ATP11AP98196 1134 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 SLMAPQ14BN4 828 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 RAB6CQ53S08 254 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 TTMPQ5BVD1 217 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 WDR45BQ5MNZ6 344 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 BRMS1LQ5PSV4 323 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 C9orf64Q5T6V5 341 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 PSAPL1Q6NUJ1 521 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 CROCCP2Q86T23 111 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 CCDC50Q8IVM0 306 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 ZCCHC9Q8N567 271 aaKnown RBP17.96■□□□□ 0.47
MRPL28-208ENST00000469744 BBOF1Q8ND07 529 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 SNX19Q92543 992 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 ARL8AQ96BM9 186 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 PGAP3Q96FM1 320 aaPredicted RBP17.96■□□□□ 0.47
MRPL28-208ENST00000469744 TRIM31Q9BZY9 425 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 RAB6CQ9H0N0 254 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 RSPH9Q9H1X1 276 aaPredicted RBP17.96■□□□□ 0.47
MRPL28-208ENST00000469744 C6orf106Q9H6K1 298 aaPredicted RBP17.96■□□□□ 0.47
MRPL28-208ENST00000469744 FBRSQ9HAH7 460 aa17.96■□□□□ 0.47
MRPL28-208ENST00000469744 TPRP12270 2363 aaKnown RBP17.96■□□□□ 0.47
MRPL28-208ENST00000469744 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.95■□□□□ 0.46
MRPL28-208ENST00000469744 TJP3O95049 919 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 ADRB1P08588 477 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 KRT7P08729 469 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 ATXN3P54252 364 aaPredicted RBP17.95■□□□□ 0.46
MRPL28-208ENST00000469744 OGDHQ02218 1023 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 ZNF177Q13360 481 aaPredicted RBP17.95■□□□□ 0.46
MRPL28-208ENST00000469744 PPP1R7Q15435 360 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 ALFQ53S48 1182 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 AGBL2Q5U5Z8 902 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 FAM131BQ86XD5 332 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 MMAAQ8IVH4 418 aaKnown RBP17.95■□□□□ 0.46
MRPL28-208ENST00000469744 CADM4Q8NFZ8 388 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 GANCQ8TET4 914 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 C1orf54Q8WWF1 131 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 ALG14Q96F25 216 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 ATP6V1G3Q96LB4 118 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 FRMD8P1Q9BZ68 369 aaPredicted RBP17.95■□□□□ 0.46
MRPL28-208ENST00000469744 SERGEFQ9UGK8 458 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 EIF2B4Q9UI10 523 aaKnown RBP17.95■□□□□ 0.46
MRPL28-208ENST00000469744 SLCO1B1Q9Y6L6 691 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 KNL1Q8NG31 2342 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 DOCK4Q8N1I0 1966 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 METTL12A8MUP2 240 aa17.95■□□□□ 0.46
MRPL28-208ENST00000469744 SHOX2O60902 331 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms