RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 RAP1GAP2Q684P5 730 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 PM20D1Q6GTS8 502 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 CENPLQ8N0S6 344 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-221ENST00000469415 CFAP52Q8N1V2 620 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 PPHLN1Q8NEY8 458 aaKnown RBP18.06■□□□□ 0.48
MCF2L-221ENST00000469415 SH3RF2Q8TEC5 729 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 TMA16Q96EY4 203 aaKnown RBP18.06■□□□□ 0.48
MCF2L-221ENST00000469415 STMN1P16949 149 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 AOC1P19801 751 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 ITGAXP20702 1163 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 TUSC3Q13454 348 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 RNF220Q5VTB9 566 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 LAYNQ6UX15 382 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 IFNL1Q8IU54 200 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 EGFL6Q8IUX8 553 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 GMIPQ9P107 970 aa18.06■□□□□ 0.48
MCF2L-221ENST00000469415 TSR3Q9UJK0 312 aaKnown RBP18.06■□□□□ 0.48
MCF2L-221ENST00000469415 SKIP12755 728 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 ARNTP27540 789 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 GATMP50440 423 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 NME5P56597 212 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 AP2B1P63010 937 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 PCID2Q5JVF3 399 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 SREK1Q8WXA9 508 aaKnown RBP18.05■□□□□ 0.48
MCF2L-221ENST00000469415 PSMG2Q969U7 264 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 HMCESQ96FZ2 354 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 CYP2S1Q96SQ9 504 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 CDH22Q9UJ99 828 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 MTSS1O43312 755 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 SMNDC1O75940 238 aaKnown RBP eCLIP18.05■□□□□ 0.48
MCF2L-221ENST00000469415 HARS2P49590 506 aaKnown RBP18.05■□□□□ 0.48
MCF2L-221ENST00000469415 RAP1GDS1P52306 607 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 SH2D4BQ5SQS7 431 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 SEL1L3Q68CR1 1132 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 DENND5AQ6IQ26 1287 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 RAB3IL1Q8TBN0 382 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 HEXDCQ8WVB3 486 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 SEPT5Q99719 369 aaPredicted RBP18.05■□□□□ 0.48
MCF2L-221ENST00000469415 RHOJQ9H4E5 214 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 OXSMQ9NWU1 459 aa18.05■□□□□ 0.48
MCF2L-221ENST00000469415 AAR2Q9Y312 384 aaKnown RBP18.05■□□□□ 0.48
MCF2L-221ENST00000469415 ZSWIM8A7E2V4 1837 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 A0A0U1RQF3 1178 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 MPOP05164 745 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 KCNA5P22460 613 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 SOX11P35716 441 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 CAP1Q01518 475 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 INSCQ1MX18 579 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 TRMT5Q32P41 509 aaKnown RBP18.04■□□□□ 0.48
MCF2L-221ENST00000469415 GRAMD1BQ3KR37 738 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 PIK3R6Q5UE93 754 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 ARMC3Q5W041 872 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 FAM171BQ6P995 826 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 RCN3Q96D15 328 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 EXOC2Q96KP1 924 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 SMIM14Q96QK8 99 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 ABCC13Q9NSE7 274 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 FBXO5Q9UKT4 447 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 SF3B1O75533 1304 aaKnown RBP eCLIP18.04■□□□□ 0.48
MCF2L-221ENST00000469415 A0A0U1RQS6 177 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 LUC7L3O95232 432 aaKnown RBP18.04■□□□□ 0.48
MCF2L-221ENST00000469415 RPL9P32969 192 aaKnown RBP18.04■□□□□ 0.48
MCF2L-221ENST00000469415 COG7P83436 770 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 TRIP10Q15642 601 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 LRRC8EQ6NSJ5 796 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 NEPROQ6NW34 567 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 EPGNQ6UW88 154 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 NET1Q7Z628 596 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-221ENST00000469415 PIM3Q86V86 326 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 KLHDC9Q8NEP7 349 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 CMTM5Q96DZ9 223 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 MRGPRX2Q96LB1 330 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 CDRT15Q96T59 188 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 MMADHCQ9H3L0 296 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-221ENST00000469415 ZFYVE28Q9HCC9 887 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 CSNK1G1Q9HCP0 422 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 ARHGEF38Q9NXL2 777 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 C9JVG2 144 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 HCAR3P49019 387 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 RPL14P50914 215 aaKnown RBP18.04■□□□□ 0.48
MCF2L-221ENST00000469415 CCNG1P51959 295 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 SATB1Q01826 763 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 RNF111Q6ZNA4 994 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 BLOC1S5Q8TDH9 187 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 GIPC2Q8TF65 315 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 NAT14Q8WUY8 206 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 ZNF184Q99676 751 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-221ENST00000469415 GPR22Q99680 433 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 NPAS2Q99743 824 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 POMKQ9H5K3 350 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 ANGPTL2Q9UKU9 493 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 POMPQ9Y244 141 aa18.04■□□□□ 0.48
MCF2L-221ENST00000469415 PRSS56P0CW18 603 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 FKBP1BP68106 108 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 MFSD14CQ5VZR4 134 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 CATSPERBQ9H7T0 1116 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 SP110Q9HB58 689 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 ABT1Q9ULW3 272 aaKnown RBP18.03■□□□□ 0.48
MCF2L-221ENST00000469415 ANXA9O76027 345 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 RAG1P15918 1043 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms