RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ZNF548Q8NEK5 533 aaPredicted RBP12.49□□□□□ -0.41
HDAC3-204ENST00000469207 HIC2Q96JB3 615 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 ZYG11BQ9C0D3 744 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 GPR27Q9NS67 375 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 IPO11Q9UI26 975 aaKnown RBP12.49□□□□□ -0.41
HDAC3-204ENST00000469207 DNAI1Q9UI46 699 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 DOCK4Q8N1I0 1966 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 SPTY2D1-AS1A0A0U1RR47 76 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 NEMP2A6NFY4 417 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 C16orf96A6NNT2 1141 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 TK2O00142 265 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 KALRNO60229 2985 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 GCATO75600 419 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 ALPPL2P10696 532 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 JUNDP17535 347 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 ITGB7P26010 798 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 BPIFB4P59827 614 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 HNRNPKP61978 463 aaKnown RBP eCLIP12.48□□□□□ -0.41
HDAC3-204ENST00000469207 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
HDAC3-204ENST00000469207 TCEA2Q15560 299 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 C3orf38Q5JPI3 329 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 PERM1Q5SV97 790 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 NAA35Q5VZE5 725 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 RETSATQ6NUM9 610 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 EFL1Q7Z2Z2 1120 aaKnown RBP12.48□□□□□ -0.41
HDAC3-204ENST00000469207 PCDH20Q8N6Y1 951 aaKnown RBP12.48□□□□□ -0.41
HDAC3-204ENST00000469207 FAM181AQ8N9Y4 354 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 ZNF248Q8NDW4 579 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 MAPK15Q8TD08 544 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 LMX1AQ8TE12 382 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 SLC20A1Q8WUM9 679 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 PPP1R16AQ96I34 528 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 DEPDC7Q96QD5 511 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 HAPLN3Q96S86 360 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 TUBGCP2Q9BSJ2 902 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 C1QTNF2Q9BXJ5 285 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 NAA15Q9BXJ9 866 aaKnown RBP12.48□□□□□ -0.41
HDAC3-204ENST00000469207 METTL5Q9NRN9 209 aaKnown RBP12.48□□□□□ -0.41
HDAC3-204ENST00000469207 SAMSN1Q9NSI8 373 aaKnown RBP12.48□□□□□ -0.41
HDAC3-204ENST00000469207 OR12D3Q9UGF7 316 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 SATB2Q9UPW6 733 aa12.48□□□□□ -0.41
HDAC3-204ENST00000469207 TEX51A0A1B0GUA7 166 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
HDAC3-204ENST00000469207 FPGTO14772 594 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 MMP20O60882 483 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 UGT2B4P06133 528 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 NME1P15531 152 aaKnown RBP12.47□□□□□ -0.41
HDAC3-204ENST00000469207 LSSP48449 732 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 KLK7P49862 253 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 ADKP55263 362 aaKnown RBP12.47□□□□□ -0.41
HDAC3-204ENST00000469207 SLC20A2Q08357 652 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 SGCGQ13326 291 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 ISXQ2M1V0 245 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 CCDC14Q49A88 953 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 ATXN7L2Q5T6C5 722 aaPredicted RBP12.47□□□□□ -0.41
HDAC3-204ENST00000469207 KIAA1161Q6NSJ0 714 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 RWDD4Q6NW29 188 aaKnown RBP12.47□□□□□ -0.41
HDAC3-204ENST00000469207 FOXR1Q6PIV2 292 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 KYAT3Q6YP21 454 aaKnown RBP12.47□□□□□ -0.41
HDAC3-204ENST00000469207 MLKLQ8NB16 471 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 JOSD2Q8TAC2 188 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 SLC30A5Q8TAD4 765 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 GPT2Q8TD30 523 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 RXFP2Q8WXD0 754 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 ARHGEF2Q92974 986 aaKnown RBP12.47□□□□□ -0.41
HDAC3-204ENST00000469207 IFT43Q96FT9 208 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 ATXN7L3BQ96GX2 97 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 ZNF578Q96N58 590 aaPredicted RBP12.47□□□□□ -0.41
HDAC3-204ENST00000469207 KLHL32Q96NJ5 620 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 SEMA4CQ9C0C4 833 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 CEP44Q9C0F1 390 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 POLR1BQ9H9Y6 1135 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 ASCL3Q9NQ33 180 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 MBNL1Q9NR56 388 aaKnown RBP12.47□□□□□ -0.41
HDAC3-204ENST00000469207 ATMQ13315 3056 aa12.47□□□□□ -0.41
HDAC3-204ENST00000469207 KRIT1O00522 736 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 NEMP1O14524 444 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 MUSKO15146 869 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 KLK10O43240 276 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 AQP9O43315 295 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 AP1G1O43747 822 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 GP1BAP07359 652 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 CELA2BP08218 269 aaPredicted RBP12.46□□□□□ -0.41
HDAC3-204ENST00000469207 PLA2G2AP14555 144 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 UCHL3P15374 230 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 CHRNB2P17787 502 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 ADRA1BP35368 520 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 SCNN1AP37088 669 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 RABIFP47224 123 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 DUSP3P51452 185 aaPredicted RBP12.46□□□□□ -0.41
HDAC3-204ENST00000469207 PCBP4P57723 403 aaKnown RBP12.46□□□□□ -0.41
HDAC3-204ENST00000469207 PFN3P60673 137 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 NOMO3P69849 1222 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 LY6DQ14210 128 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 DPCR1Q3MIW9 517 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 ZNF783Q6ZMS7 281 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 ZNF605Q86T29 641 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 VPS36Q86VN1 386 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 NLRP14Q86W24 1093 aa12.46□□□□□ -0.41
HDAC3-204ENST00000469207 PARGQ86W56 976 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms