RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 DDX50Q9BQ39 737 aaKnown RBP12.88□□□□□ -0.35
UBR4-210ENST00000466969 NUDT22Q9BRQ3 303 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 TRIM55Q9BYV6 548 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 SPRY4Q9C004 299 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 TWSG1Q9GZX9 223 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 OCIAD1Q9NX40 245 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 RPS6KL1Q9Y6S9 549 aa12.88□□□□□ -0.35
UBR4-210ENST00000466969 FAM221AA4D161 298 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 ZSCAN5CA6NGD5 496 aaPredicted RBP12.87□□□□□ -0.35
UBR4-210ENST00000466969 NUDT21O43809 227 aaKnown RBP12.87□□□□□ -0.35
UBR4-210ENST00000466969 PHACTR2O75167 634 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 STK17BO94768 372 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 DLSTP36957 453 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 HK3P52790 923 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 ART1P52961 327 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 B4GALNT1Q00973 533 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 FAM133BQ5BKY9 247 aaKnown RBP12.87□□□□□ -0.35
UBR4-210ENST00000466969 CEACAM20Q6UY09 585 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 MACC1Q6ZN28 852 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 ZSCAN30Q86W11 494 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 SFR1Q86XK3 245 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 CBWD2Q8IUF1 395 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 HID1Q8IV36 788 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 UNC45BQ8IWX7 931 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 NXPE1Q8N323 547 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 DENND6BQ8NEG7 585 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 PRICKLE1Q96MT3 831 aaPredicted RBP12.87□□□□□ -0.35
UBR4-210ENST00000466969 KLF6Q99612 283 aaPredicted RBP12.87□□□□□ -0.35
UBR4-210ENST00000466969 ZPBPQ9BS86 351 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 XYLT2Q9H1B5 865 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 FOXP1Q9H334 677 aaPredicted RBP12.87□□□□□ -0.35
UBR4-210ENST00000466969 MLXIPLQ9NP71 852 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 SLC25A13Q9UJS0 675 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 PCDHGB7Q9Y5F8 929 aa12.87□□□□□ -0.35
UBR4-210ENST00000466969 ACSL4O60488 711 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 KATNA1O75449 491 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 GCNT3O95395 438 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 FECHP22830 423 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 F8A1P23610 371 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 NFKBIAP25963 317 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 ALDH4A1P30038 563 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 LIMK2P53671 638 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 KRTAP10-9P60411 292 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 YPEL5P62699 121 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 MCM6Q14566 821 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 DLG2Q15700 870 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 CHRNA6Q15825 494 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 ZNF699Q32M78 642 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 PAPD7Q5XG87 772 aaKnown RBP12.86□□□□□ -0.35
UBR4-210ENST00000466969 UNC93AQ86WB7 457 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 HPS6Q86YV9 775 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 CISD2Q8N5K1 135 aaKnown RBP12.86□□□□□ -0.35
UBR4-210ENST00000466969 CCDC114Q96M63 670 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 CTRCQ99895 268 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 SDCBP2Q9H190 292 aa12.86□□□□□ -0.35
UBR4-210ENST00000466969 TMEM184BQ9Y519 407 aaPredicted RBP12.86□□□□□ -0.35
UBR4-210ENST00000466969 STAB1Q9NY15 2570 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 JMJD1CQ15652 2540 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 PIPSLA2A3N6 862 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 MSI1O43347 362 aaKnown RBP12.85□□□□□ -0.35
UBR4-210ENST00000466969 B4GAT1O43505 415 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 ATP9BO43861 1147 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 P4HA1P13674 534 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 CHRNA3P32297 505 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 EIF4A3P38919 411 aaKnown RBP12.85□□□□□ -0.35
UBR4-210ENST00000466969 CCL11P51671 97 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 OR1D5P58170 312 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 SLC12A1Q13621 1099 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 LINGO4Q6UY18 593 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 RHOT1Q8IXI2 618 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 ZNF295-AS1Q8N0V1 137 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 CFAP52Q8N1V2 620 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 NDRG1Q92597 394 aaKnown RBP12.85□□□□□ -0.35
UBR4-210ENST00000466969 CALML4Q96GE6 196 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 PPP1R16AQ96I34 528 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 STRA6Q9BX79 667 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 HDAC8Q9BY41 377 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 GSX1Q9H4S2 264 aaPredicted RBP12.85□□□□□ -0.35
UBR4-210ENST00000466969 VRTNQ9H8Y1 702 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 ACSS2Q9NR19 701 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 HMGXB4Q9UGU5 601 aa12.85□□□□□ -0.35
UBR4-210ENST00000466969 G3BP2Q9UN86 482 aaKnown RBP12.85□□□□□ -0.35
UBR4-210ENST00000466969 ACANP16112 2415 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 RASGRP1O95267 797 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 PRNPP04156 253 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 CTSLP07711 333 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 STAT1P42224 750 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 NEK3P51956 506 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 PPP2R2AP63151 447 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 ADAM9Q13443 819 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 HLTFQ14527 1009 aaKnown RBP eCLIP12.84□□□□□ -0.35
UBR4-210ENST00000466969 FAM46DQ8NEK8 389 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 TMIEQ8NEW7 156 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 OR4D9Q8NGE8 314 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 TSACCQ96A04 125 aaPredicted RBP12.84□□□□□ -0.35
UBR4-210ENST00000466969 CCDC127Q96BQ5 260 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 DUSP16Q9BY84 665 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 KIAA1586Q9HCI6 787 aa12.84□□□□□ -0.35
UBR4-210ENST00000466969 TBC1D7Q9P0N9 293 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms