RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 DNAI2Q9GZS0 605 aa13.16□□□□□ -0.3
PDZRN3-205ENST00000466780 NUP205Q92621 2012 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 MAGEB16A2A368 324 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 PRORSD1PA6NEY8 169 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 EPHX2P34913 555 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 NDUFV1P49821 464 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 GJC2Q5T442 439 aaPredicted RBP13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 CNSTQ6PJW8 725 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 POTEHQ6S545 545 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 LPCAT2Q7L5N7 544 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 HERC6Q8IVU3 1022 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 SPNS2Q8IVW8 549 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 LRRC52Q8N7C0 313 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 TXNDC5Q8NBS9 432 aaKnown RBP13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 CIB1Q99828 191 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 UNC93B1Q9H1C4 597 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 TRPV6Q9H1D0 765 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 OSBPL2Q9H1P3 480 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 CACNA2D2Q9NY47 1150 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 ERI2A8K979 691 aaKnown RBP13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 SPTLC1O15269 473 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 IMPDH2P12268 514 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 GNL1P36915 607 aaPredicted RBP13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 CDH15P55291 814 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 TMED1Q13445 227 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 EML3Q32P44 896 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 C9orf57Q5W0N0 161 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 HFE2Q6ZVN8 426 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 TRIM74Q86UV6 250 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 TRIM73Q86UV7 250 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 ABTB1Q969K4 478 aaPredicted RBP13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 HSPBAP1Q96EW2 488 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 MAML3Q96JK9 1138 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 SNX27Q96L92 541 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 UHRF1Q96T88 793 aaPredicted RBP13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 DUS2Q9NX74 493 aaKnown RBP13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 SARDHQ9UL12 918 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 MYRFQ9Y2G1 1151 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 ZNF510Q9Y2H8 683 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 SNX13Q9Y5W8 968 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 CSADQ9Y600 493 aa13.15□□□□□ -0.3
PDZRN3-205ENST00000466780 TCRBV3S1A0A5B6 114 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 HTRA2O43464 458 aaPredicted RBP13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 CNMDO75829 334 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 BEST1O76090 585 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 RPL10P27635 214 aaKnown RBP13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 NOS2P35228 1153 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 MPP1Q00013 466 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 REP15Q6BDI9 236 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 CYP2R1Q6VVX0 501 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 CHSY3Q70JA7 882 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 DENND6AQ8IWF6 608 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 RBM12BQ8IXT5 1001 aaKnown RBP13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 FIBCD1Q8N539 461 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 SPPL2BQ8TCT7 592 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 SGF29Q96ES7 293 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 RANBP9Q96S59 729 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 TNFRSF12AQ9NP84 129 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 IPO11Q9UI26 975 aaKnown RBP13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 ACOT9Q9Y305 439 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 SHROOM3Q8TF72 1996 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 SBF1O95248 1867 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 TANC1Q9C0D5 1861 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 NEMP2A6NFY4 417 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 TRPC5OSA6NMA1 111 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 LGALS2P05162 132 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 HNRNPLP14866 589 aaKnown RBP eCLIP13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 YBX3P16989 372 aaKnown RBP eCLIP13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 ADRA1BP35368 520 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 SEMA3BQ13214 749 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 C6orf10Q5SRN2 563 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 FAM219BQ5XKK7 198 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 SNX31Q8N9S9 440 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 KLHL23Q8NBE8 558 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 FAM110BQ8TC76 370 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 WNT8BQ93098 351 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 TOP1MTQ969P6 601 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 RMND5BQ96G75 393 aaPredicted RBP13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 KIFC1Q9BW19 673 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 NOL11Q9H8H0 719 aaKnown RBP13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 TRPC7Q9HCX4 862 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 PNPLA3Q9NST1 481 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 GMPR2Q9P2T1 348 aaKnown RBP13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 CD300AQ9UGN4 299 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 CNOT6Q9ULM6 557 aaKnown RBP13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 DERAQ9Y315 318 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 FIS1Q9Y3D6 152 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 TSC2P49815 1807 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 BPTFQ12830 3046 aa13.14□□□□□ -0.31
PDZRN3-205ENST00000466780 HEATR9A2RTY3 570 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 NPHS1O60500 1241 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 CYP2C9P11712 490 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 COL6A2P12110 1019 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 CKMT2P17540 419 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 SLC7A1P30825 629 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 STT3AP46977 705 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 CTBP1Q13363 440 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 DUS3LQ96G46 650 aaKnown RBP13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 BIRC8Q96P09 236 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms