RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 MOCOSQ96EN8 888 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 PLEKHA8Q96JA3 519 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 CNDP2Q96KP4 475 aaKnown RBP19.98■□□□□ 0.79
SDF4-205ENST00000465727 SLC25A23Q9BV35 468 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 NPLQ9BXD5 320 aaPredicted RBP19.98■□□□□ 0.79
SDF4-205ENST00000465727 B3GNT5Q9BYG0 378 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 CEP41Q9BYV8 373 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 MAGEB5Q9BZ81 275 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 CD320Q9NPF0 282 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 CDC14AQ9UNH5 594 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 FUOMA2VDF0 154 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 SOBPA7XYQ1 873 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 H3BMQ9 156 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 GABBR2O75899 941 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 INHBBP09529 407 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 GTF2A2P52657 109 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 PRAMEP78395 509 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 GRM3Q14832 879 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 PAFAH1B3Q15102 231 aaKnown RBP19.97■□□□□ 0.79
SDF4-205ENST00000465727 PSMD5Q16401 504 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 ZC3HC1Q86WB0 502 aaKnown RBP19.97■□□□□ 0.79
SDF4-205ENST00000465727 GOLM1Q8NBJ4 401 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 AGBL3Q8NEM8 1001 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 TBC1D15Q8TC07 691 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 COG8Q96MW5 612 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 PRDM12Q9H4Q4 367 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 TRPC7Q9HCX4 862 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 FAM49BQ9NUQ9 324 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 PRMT7Q9NVM4 692 aaPredicted RBP19.97■□□□□ 0.79
SDF4-205ENST00000465727 RUVBL2Q9Y230 463 aaKnown RBP19.97■□□□□ 0.79
SDF4-205ENST00000465727 CLEC11AQ9Y240 323 aa19.97■□□□□ 0.79
SDF4-205ENST00000465727 AP3B1O00203 1094 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 DLX3O60479 287 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 ATE1O95260 518 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 ESRRBO95718 433 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 SLC35E2BP0CK96 405 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 CKMT2P17540 419 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 FASTKQ14296 549 aaKnown RBP19.96■□□□□ 0.79
SDF4-205ENST00000465727 USP10Q14694 798 aaKnown RBP19.96■□□□□ 0.79
SDF4-205ENST00000465727 MOGQ16653 247 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 ANKDD1AQ495B1 522 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 C8orf82Q6P1X6 216 aaPredicted RBP19.96■□□□□ 0.79
SDF4-205ENST00000465727 DCLRE1AQ6PJP8 1040 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 ERO1BQ86YB8 467 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 PYROXD2Q8N2H3 581 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 TMEM130Q8N3G9 435 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 ZUFSPQ96AP4 578 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 MFSD3Q96ES6 412 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 APBA2Q99767 749 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 ADI1Q9BV57 179 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 NFKBIZQ9BYH8 718 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 INIPQ9NRY2 104 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 IARS2Q9NSE4 1012 aaKnown RBP19.96■□□□□ 0.79
SDF4-205ENST00000465727 SMOXQ9NWM0 555 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 KLHL8Q9P2G9 620 aaPredicted RBP19.96■□□□□ 0.79
SDF4-205ENST00000465727 GNPTGQ9UJJ9 305 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 CROTQ9UKG9 612 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 AFG3L2Q9Y4W6 797 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 DOCK1Q14185 1865 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 WNT10BO00744 389 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 FBP2O00757 339 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 SRP72O76094 671 aaKnown RBP19.96■□□□□ 0.79
SDF4-205ENST00000465727 SNRPB2P08579 225 aaKnown RBP19.96■□□□□ 0.79
SDF4-205ENST00000465727 ABCG1P45844 678 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 BCAP31P51572 246 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 OXCT1P55809 520 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 DNAJB13P59910 316 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 METTL7BQ6UX53 244 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 NT5DC4Q86YG4 428 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 ACVR1CQ8NER5 493 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 FLAD1Q8NFF5 587 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 RNF139Q8WU17 664 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 CHPT1Q8WUD6 406 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 KCTD4Q8WVF5 259 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 SLC35B4Q969S0 331 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 TEPSINQ96N21 525 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 TRIM15Q9C019 465 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 ADAMTS10Q9H324 1103 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 CCM2LQ9NUG4 571 aaPredicted RBP19.96■□□□□ 0.79
SDF4-205ENST00000465727 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.96■□□□□ 0.791e-6■■■□□ 14.8
SDF4-205ENST00000465727 XPR1Q9UBH6 696 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 ACOT9Q9Y305 439 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 RAD54BQ9Y620 910 aa19.96■□□□□ 0.79
SDF4-205ENST00000465727 ZBTB42B2RXF5 422 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 TIPRLO75663 272 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 DNAJB2P25686 324 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 GABRB3P28472 473 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 KPNA2P52292 529 aaKnown RBP19.95■□□□□ 0.78
SDF4-205ENST00000465727 FSTL1Q12841 308 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 MERTKQ12866 999 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 RALGDSQ12967 914 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 MTA1Q13330 715 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 UGP2Q16851 508 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 KCTD11Q693B1 232 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 CYP2R1Q6VVX0 501 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 FASTKD5Q7L8L6 764 aaKnown RBP19.95■□□□□ 0.78
SDF4-205ENST00000465727 TUBA1CQ9BQE3 449 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 AS3MTQ9HBK9 375 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 ACSS2Q9NR19 701 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 DPP3Q9NY33 737 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms