RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 CNTN6Q9UQ52 1028 aa11.88□□□□□ -0.51
PCCB-203ENST00000462542 PCDHGA4Q9Y5G9 962 aa11.88□□□□□ -0.51
PCCB-203ENST00000462542 WASF2Q9Y6W5 498 aa11.88□□□□□ -0.51
PCCB-203ENST00000462542 SYNJ2BP-COX16A0A087WUM0 186 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 A0A1W2PQ27 194 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 A0A1W2PQ64 194 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 A0A1W2PQC6 194 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 RNF103O00237 685 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 P4HA2O15460 535 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 SNAP91O60641 907 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 ALPIP09923 528 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 TSHRP16473 764 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 CD82P27701 267 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 NDUFA8P51970 172 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 PITX1P78337 314 aaPredicted RBP11.87□□□□□ -0.51
PCCB-203ENST00000462542 C1orf61Q13536 156 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 ELOCQ15369 112 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 TAF5Q15542 800 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 COBLL1Q53SF7 1204 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 CARD16Q5EG05 197 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 ANKRD40Q6AI12 368 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 DENND1BQ6P3S1 775 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 C22orf39Q6P5X5 142 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 KRBA2Q6ZNG9 492 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 RRAGAQ7L523 313 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 PLPP6Q8IY26 295 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 PHACTR4Q8IZ21 702 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 DEFB106AQ8N104 65 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 PCDH20Q8N6Y1 951 aaKnown RBP11.87□□□□□ -0.51
PCCB-203ENST00000462542 ARL10Q8N8L6 244 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 ZNF606Q8WXB4 792 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 CENPTQ96BT3 561 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 ARHGEF26Q96DR7 871 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 SIK2Q9H0K1 926 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 TNKS2Q9H2K2 1166 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 RMND1Q9NWS8 449 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 COX16Q9P0S2 106 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 GULP1Q9UBP9 304 aa11.87□□□□□ -0.51
PCCB-203ENST00000462542 CXorf51AA0A1B0GTR3 108 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 DRGXA6NNA5 263 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 TMEM110-MUSTN1A8MSY1 372 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 D6RAR5 112 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 NEMP1O14524 444 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 HSF2BPO75031 334 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 PAGE1O75459 146 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 ZNF821O75541 412 aaPredicted RBP11.86□□□□□ -0.51
PCCB-203ENST00000462542 CNTN5O94779 1100 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 CALCAP01258 141 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 CR2P20023 1033 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 PRCPP42785 496 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 PEX5P50542 639 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 IRAK1P51617 712 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 SNX16P57768 344 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 CCL7P80098 99 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 PPARDQ03181 441 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 LRRC63Q05C16 580 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 TPRG1LQ5T0D9 272 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 TMEM164Q5U3C3 297 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 LRRC31Q6UY01 552 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 LINGO4Q6UY18 593 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 ZNF783Q6ZMS7 281 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 B3GNT8Q7Z7M8 397 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 DTX1Q86Y01 620 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 SMYD4Q8IYR2 804 aaPredicted RBP11.86□□□□□ -0.51
PCCB-203ENST00000462542 RBFAQ8N0V3 343 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 EHBP1Q8NDI1 1231 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 LMO3Q8TAP4 145 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 ZNF564Q8TBZ8 553 aaPredicted RBP11.86□□□□□ -0.51
PCCB-203ENST00000462542 KAT5Q92993 513 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 C1orf74Q96LT6 269 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 LRRC61Q9BV99 259 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 C1QTNF7Q9BXJ2 289 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 GTPBP4Q9BZE4 634 aaKnown RBP11.86□□□□□ -0.51
PCCB-203ENST00000462542 CLPBQ9H078 707 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 TCEAL2Q9H3H9 227 aaPredicted RBP11.86□□□□□ -0.51
PCCB-203ENST00000462542 LRRN3Q9H3W5 708 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 WDCPQ9H6R7 721 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 RRN3Q9NYV6 651 aa11.86□□□□□ -0.51
PCCB-203ENST00000462542 LRRK2Q5S007 2527 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 A0A0D9SEW6 157 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 ILVBLA1L0T0 632 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 C16orf96A6NNT2 1141 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 CASC3O15234 703 aaKnown RBP11.85□□□□□ -0.51
PCCB-203ENST00000462542 LETM1O95202 739 aaPredicted RBP11.85□□□□□ -0.51
PCCB-203ENST00000462542 CTSEP14091 401 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 OR1E1P30953 314 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 EIF4A3P38919 411 aaKnown RBP11.85□□□□□ -0.51
PCCB-203ENST00000462542 DNA2P51530 1060 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 ZFP36L1Q07352 338 aaKnown RBP11.85□□□□□ -0.51
PCCB-203ENST00000462542 NME3Q13232 169 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 ALFQ53S48 1182 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 BRMS1LQ5PSV4 323 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 ZNF658Q5TYW1 1059 aaPredicted RBP11.85□□□□□ -0.51
PCCB-203ENST00000462542 MACC1Q6ZN28 852 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 PARS2Q7L3T8 475 aaKnown RBP11.85□□□□□ -0.51
PCCB-203ENST00000462542 CCDC74AQ96AQ1 378 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 ISG20Q96AZ6 181 aaKnown RBP11.85□□□□□ -0.51
PCCB-203ENST00000462542 SPATA32Q96LK8 384 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 CMKLR1Q99788 373 aa11.85□□□□□ -0.51
PCCB-203ENST00000462542 CPEB1Q9BZB8 566 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms