RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 HEPHQ9BQS7 1158 aa11.06□□□□□ -0.64
CBX3-205ENST00000462165 C1QTNF2Q9BXJ5 285 aa11.06□□□□□ -0.64
CBX3-205ENST00000462165 FAM117AQ9C073 453 aa11.06□□□□□ -0.64
CBX3-205ENST00000462165 CEP44Q9C0F1 390 aa11.06□□□□□ -0.64
CBX3-205ENST00000462165 INTS2Q9H0H0 1204 aaKnown RBP11.06□□□□□ -0.64
CBX3-205ENST00000462165 TKTL2Q9H0I9 626 aa11.06□□□□□ -0.64
CBX3-205ENST00000462165 WDCPQ9H6R7 721 aa11.06□□□□□ -0.64
CBX3-205ENST00000462165 ARHGEF38Q9NXL2 777 aa11.06□□□□□ -0.64
CBX3-205ENST00000462165 RRN3Q9NYV6 651 aa11.06□□□□□ -0.64
CBX3-205ENST00000462165 SPASTQ9UBP0 616 aa11.06□□□□□ -0.64
CBX3-205ENST00000462165 IL17BQ9UHF5 180 aa11.06□□□□□ -0.64
CBX3-205ENST00000462165 ATXN7L1Q9ULK2 861 aaPredicted RBP11.06□□□□□ -0.64
CBX3-205ENST00000462165 I6L893 689 aaPredicted RBP11.05□□□□□ -0.64
CBX3-205ENST00000462165 NTN3O00634 580 aaPredicted RBP11.05□□□□□ -0.64
CBX3-205ENST00000462165 TERTO14746 1132 aaKnown RBP11.05□□□□□ -0.64
CBX3-205ENST00000462165 CASC3O15234 703 aaKnown RBP11.05□□□□□ -0.64
CBX3-205ENST00000462165 GCATO75600 419 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 ENDOD1O94919 500 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 ADCY5O95622 1261 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 AFPP02771 609 aaKnown RBP11.05□□□□□ -0.64
CBX3-205ENST00000462165 PPP1R2P41236 205 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 SERPINH1P50454 418 aaKnown RBP11.05□□□□□ -0.64
CBX3-205ENST00000462165 MARSP56192 900 aaKnown RBP11.05□□□□□ -0.64
CBX3-205ENST00000462165 SLC20A2Q08357 652 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 NFATC3Q12968 1075 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 SGCGQ13326 291 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 EIF3IQ13347 325 aaKnown RBP11.05□□□□□ -0.64
CBX3-205ENST00000462165 SPIDRQ14159 915 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 PTK2BQ14289 1009 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 GSE1Q14687 1217 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 LINC00303Q3SY05 128 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 CARD16Q5EG05 197 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 RETSATQ6NUM9 610 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 TTI2Q6NXR4 508 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 OLFML1Q6UWY5 402 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 ZNF783Q6ZMS7 281 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 SLC26A9Q7LBE3 791 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 RBFAQ8N0V3 343 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 PCDH20Q8N6Y1 951 aaKnown RBP11.05□□□□□ -0.64
CBX3-205ENST00000462165 ZNF397Q8NF99 534 aaPredicted RBP11.05□□□□□ -0.64
CBX3-205ENST00000462165 OR7D4Q8NG98 312 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 RAB7BQ96AH8 199 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 C1orf74Q96LT6 269 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 NPY6RQ99463 290 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 ANLNQ9NQW6 1124 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 PIGVQ9NUD9 493 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 APOBEC3BQ9UH17 382 aaKnown RBP11.05□□□□□ -0.64
CBX3-205ENST00000462165 PCDHGC3Q9UN70 934 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 PCDHGA7Q9Y5G6 932 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 ATP6V1DQ9Y5K8 247 aa11.05□□□□□ -0.64
CBX3-205ENST00000462165 HEMK1Q9Y5R4 338 aaPredicted RBP11.05□□□□□ -0.64
CBX3-205ENST00000462165 PTPN13Q12923 2485 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 LRP4O75096 1905 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 IGLV3-10A0A075B6K4 115 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 ILVBLA1L0T0 632 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 IGLON5A6NGN9 336 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 BECN2A8MW95 431 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 LMO7DNF2Z398 122 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 TSPAN6O43657 245 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 ZMPSTE24O75844 475 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 GNA14O95837 355 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 ERBB2P04626 1255 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 ITGB2P05107 769 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 ANXA6P08133 673 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 CXCR3P49682 368 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 CCNHP51946 323 aaPredicted RBP11.04□□□□□ -0.64
CBX3-205ENST00000462165 ADKP55263 362 aaKnown RBP11.04□□□□□ -0.64
CBX3-205ENST00000462165 SLC6A3Q01959 620 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 PRRT3Q5FWE3 981 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 ARTNQ5T4W7 220 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 ACBD5Q5T8D3 534 aaPredicted RBP11.04□□□□□ -0.64
CBX3-205ENST00000462165 LRRC31Q6UY01 552 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 TFAP2DQ7Z6R9 452 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 PHACTR4Q8IZ21 702 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 FBXO39Q8N4B4 442 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 SGF29Q96ES7 293 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 PGAP3Q96FM1 320 aaPredicted RBP11.04□□□□□ -0.64
CBX3-205ENST00000462165 FAM81BQ96LP2 452 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 LRRC61Q9BV99 259 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 TCEAL2Q9H3H9 227 aaPredicted RBP11.04□□□□□ -0.64
CBX3-205ENST00000462165 GDPD2Q9HCC8 539 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 STARD5Q9NSY2 213 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 MPP6Q9NZW5 540 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 ACSL6Q9UKU0 697 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 PNMA8BQ9ULN7 279 aaPredicted RBP11.04□□□□□ -0.64
CBX3-205ENST00000462165 PADI4Q9UM07 663 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.04□□□□□ -0.64
CBX3-205ENST00000462165 SNX10Q9Y5X0 201 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 LRRK1Q38SD2 2015 aa11.04□□□□□ -0.64
CBX3-205ENST00000462165 UNC13CQ8NB66 2214 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 CXorf51AA0A1B0GTR3 108 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 BICDL2A1A5D9 508 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 PLD2O14939 933 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 YY2O15391 372 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 NOBOXO60393 691 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 GJB6O95452 261 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 CD160O95971 181 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 OR1E1P30953 314 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 SLC5A2P31639 672 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms