RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 CPXM2Q8N436 756 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 DCBLD1Q8N8Z6 715 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 C12orf29Q8N999 325 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 XXYLT1Q8NBI6 393 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 ZMIZ2Q8NF64 920 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 OR2T34Q8NGX1 318 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 DNAJC19Q96DA6 116 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 FRMD6Q96NE9 622 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 KCNC2Q96PR1 638 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 DEPDC7Q96QD5 511 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 HNRNPABQ99729 332 aaKnown RBP5.23□□□□□ -1.57
BRCA1-206ENST00000461574 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.23□□□□□ -1.57
BRCA1-206ENST00000461574 DPH1Q9BZG8 443 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 IMPG2Q9BZV3 1241 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 ABCG4Q9H172 646 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 TMEM245Q9H330 911 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 PABPC3Q9H361 631 aaKnown RBP5.23□□□□□ -1.57
BRCA1-206ENST00000461574 CSNK1G1Q9HCP0 422 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 PRSS16Q9NQE7 514 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 AGPAT3Q9NRZ7 376 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 CLIC5Q9NZA1 410 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 MARCH2Q9P0N8 246 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 HMGXB4Q9UGU5 601 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 SUN2Q9UH99 717 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 GPR160Q9UJ42 338 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 GGA2Q9UJY4 613 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 CEP83Q9Y592 693 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 PCDHB1Q9Y5F3 818 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 TDRD6O60522 2096 aaKnown RBP5.23□□□□□ -1.57
BRCA1-206ENST00000461574 UBE4BO95155 1302 aa5.23□□□□□ -1.57
BRCA1-206ENST00000461574 TBC1D3DA0A087WVF3 549 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 TBC1D3IA0A087WXS9 549 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 TBC1D3EA0A087X179 549 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 TBC1D3KA0A087X1G2 549 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 VPS37CA5D8V6 355 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-206ENST00000461574 TBC1D3FA6NER0 549 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-206ENST00000461574 TBC1D3LB9A6J9 549 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 MID1O15344 667 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 EIF3DO15371 548 aaKnown RBP eCLIP5.22□□□□□ -1.57
BRCA1-206ENST00000461574 FFAR2O15552 330 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 PSPNO60542 156 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 EXOC3O60645 756 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 CSO75390 466 aaKnown RBP5.22□□□□□ -1.57
BRCA1-206ENST00000461574 MT-CO3P00414 261 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 WNT1P04628 370 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 DLDP09622 509 aaKnown RBP5.22□□□□□ -1.57
BRCA1-206ENST00000461574 TBC1D3HP0C7X1 549 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 ALPPL2P10696 532 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 KRT10P13645 584 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 ACP1P24666 158 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 HOXD9P28356 352 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-206ENST00000461574 RBMS1P29558 406 aaKnown RBP5.22□□□□□ -1.57
BRCA1-206ENST00000461574 HLA-FP30511 346 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 PIK3CAP42336 1068 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 PSMD8P48556 350 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 CASP4P49662 377 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 AP3M2P53677 418 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 GALCP54803 685 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 SLC8A3P57103 927 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 NXPH1P58417 271 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 ERVPABLB-1P60509 514 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 ASIC1P78348 528 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 SSPNQ14714 243 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 SHBQ15464 509 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 CST6Q15828 149 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 BMT2Q1RMZ1 405 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 SGSM1Q2NKQ1 1148 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 ZSCAN23Q3MJ62 389 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 KIAA1614Q5VZ46 1190 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 RNF219Q5W0B1 726 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-206ENST00000461574 MBLAC2Q68D91 279 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 TBC1D3GQ6DHY5 549 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 TBC1D3CQ6IPX1 549 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 CCDC81Q6ZN84 652 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 CCDC186Q7Z3E2 898 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 TMC6Q7Z403 805 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 BRAPQ7Z569 592 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 PRPF39Q86UA1 669 aaKnown RBP5.22□□□□□ -1.57
BRCA1-206ENST00000461574 UNC93AQ86WB7 457 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 MMAAQ8IVH4 418 aaKnown RBP5.22□□□□□ -1.57
BRCA1-206ENST00000461574 NELFCDQ8IXH7 590 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 TBC1D3Q8IZP1 549 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-206ENST00000461574 PDILTQ8N807 584 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 CCDC150Q8NCX0 1101 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 OR14C36Q8NHC7 312 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 RNF139Q8WU17 664 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 HPS3Q969F9 1004 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 CYFIP2Q96F07 1278 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 P2RY11Q96G91 374 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 HIC2Q96JB3 615 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 VCPIP1Q96JH7 1222 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 PANK2Q9BZ23 570 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 LRRC27Q9C0I9 530 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 SDCBP2Q9H190 292 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 XYLT2Q9H1B5 865 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 RSPH9Q9H1X1 276 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-206ENST00000461574 ERVMER34-1Q9H9K5 563 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 POLR1BQ9H9Y6 1135 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 PNPLA8Q9NP80 782 aa5.22□□□□□ -1.57
BRCA1-206ENST00000461574 IL17BQ9UHF5 180 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms