RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CCDC73Q6ZRK6 1079 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 ZNF627Q7L945 461 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 SFR1Q86XK3 245 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 ZNF354CQ86Y25 554 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 NKAPQ8N5F7 415 aaKnown RBP5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 RNF169Q8NCN4 708 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 ENGASEQ8NFI3 743 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 OR7D4Q8NG98 312 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 CAGE1Q8TC20 777 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 KIAA1524Q8TCG1 905 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 ZNF480Q8WV37 535 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 MRPS27Q92552 414 aaKnown RBP5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 PAGE5Q96GU1 130 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 GPHA2Q96T91 129 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 APOL6Q9BWW8 343 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 EIF2AQ9BY44 585 aaKnown RBP5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 IFIH1Q9BYX4 1025 aaKnown RBP5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 UBXN6Q9BZV1 441 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 TRIM7Q9C029 511 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 INO80BQ9C086 356 aaPredicted RBP5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 UNKQ9C0B0 810 aaKnown RBP5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 WDCPQ9H6R7 721 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 LDAHQ9H6V9 325 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 CACNG4Q9UBN1 327 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 CDC23Q9UJX2 597 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 BLOC1S6Q9UL45 172 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 PADI4Q9UM07 663 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 HES2Q9Y543 173 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 REV3LO60673 3130 aa5.08□□□□□ -1.6
ATPAF1-203ENST00000460928 CHD7Q9P2D1 2997 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 DCHS1Q96JQ0 3298 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 FAM237AA0A1B0GTK4 181 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 POM121BA6NF01 834 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 ANKRD63C9JTQ0 380 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 KLRC4O43908 158 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 TSPAN1O60635 241 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 DKC1O60832 514 aaKnown RBP eCLIP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 ALDH1A2O94788 518 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 CSPG5O95196 566 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 IL18RAPO95256 599 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 FGBP02675 491 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 CXCL10P02778 98 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 FAM163BP0C2L3 166 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 FTH1P19P0C7X4 201 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 BRAFP15056 766 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 PECAM1P16284 738 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 DDCP20711 480 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 HOXA11P31270 313 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 CRYBB1P53674 252 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 SUMO3P55854 103 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 PTENP60484 403 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 OSTNP61366 133 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 WDR5P61964 334 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 ASIC1P78348 528 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 DEUP1Q05D60 604 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 ZSCAN23Q3MJ62 389 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 FLYWCH1Q4VC44 716 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 KHDC1LQ5JSQ8 128 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 ATL3Q6DD88 541 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 HIBCHQ6NVY1 386 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 SLC39A4Q6P5W5 647 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 CATSPER4Q7RTX7 472 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 TADA2BQ86TJ2 420 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 APLFQ8IW19 511 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 TMEM199Q8N511 208 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 MYCT1Q8N699 235 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 PLA2G15Q8NCC3 412 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 CCDC112Q8NEF3 446 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 STON2Q8WXE9 905 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 PSPC1Q8WXF1 523 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 GCDHQ92947 438 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 DTNBP1Q96EV8 351 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 FIZ1Q96SL8 496 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 BAG1Q99933 345 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 ADAM2Q99965 735 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 TRIM9Q9C026 710 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 NT5C3AQ9H0P0 336 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 RMI1Q9H9A7 625 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 PNPLA8Q9NP80 782 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 BATF3Q9NR55 127 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 LANCL2Q9NS86 450 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 DACT1Q9NYF0 836 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 CPNE7Q9UBL6 633 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 TRPS1Q9UHF7 1281 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 ITGB1BP2Q9UKP3 347 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 PIN4Q9Y237 131 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 GDAQ9Y2T3 454 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 ATP6V1DQ9Y5K8 247 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 TTC3P53804 2025 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 BRWD1Q9NSI6 2320 aa5.07□□□□□ -1.6
ATPAF1-203ENST00000460928 COL4A6Q14031 1691 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 DENND3A2RUS2 1198 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 GOLGA8IPA6NC78 632 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 C2orf78A6NCI8 922 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 GOLGA6L4A6NEF3 574 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 GOLGA8JA6NMD2 632 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 NT5C1B-RDH14C9J2C7 533 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 F8W810 466 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms