RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 OR6C75A6NL08 312 aa16.54■□□□□ 0.24
LSS-205ENST00000457828 RPL17P18621 184 aaKnown RBP16.54■□□□□ 0.24
LSS-205ENST00000457828 ATP5C1P36542 298 aaKnown RBP16.54■□□□□ 0.24
LSS-205ENST00000457828 NSUN2Q08J23 767 aaKnown RBP eCLIP16.54■□□□□ 0.24
LSS-205ENST00000457828 GRTP1Q5TC63 336 aa16.54■□□□□ 0.24
LSS-205ENST00000457828 CDCA2Q69YH5 1023 aaPredicted RBP16.54■□□□□ 0.24
LSS-205ENST00000457828 PHF21BQ96EK2 531 aa16.54■□□□□ 0.24
LSS-205ENST00000457828 HSFY1Q96LI6 401 aa16.54■□□□□ 0.24
LSS-205ENST00000457828 SYBUQ9NX95 663 aa16.54■□□□□ 0.24
LSS-205ENST00000457828 HMGXB4Q9UGU5 601 aa16.54■□□□□ 0.24
LSS-205ENST00000457828 TSR3Q9UJK0 312 aaKnown RBP16.54■□□□□ 0.24
LSS-205ENST00000457828 CCDC189A1A4V9 331 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 BHMG1C9JSJ3 638 aaPredicted RBP16.53■□□□□ 0.24
LSS-205ENST00000457828 APOA4P06727 396 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 KPNA1P52294 538 aaPredicted RBP16.53■□□□□ 0.24
LSS-205ENST00000457828 PRKAA1Q13131 559 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 IRF5Q13568 498 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 CSHL1Q14406 222 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 NAPEPLDQ6IQ20 393 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 FBXW8Q8N3Y1 598 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 SPATA6LQ8N4H0 392 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 LENG8Q96PV6 779 aaPredicted RBP16.53■□□□□ 0.24
LSS-205ENST00000457828 CPNE1Q99829 537 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 SDCBP2Q9H190 292 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 LHX5Q9H2C1 402 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 PRDM12Q9H4Q4 367 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 EML4Q9HC35 981 aaKnown RBP16.53■□□□□ 0.24
LSS-205ENST00000457828 TMEM216Q9P0N5 145 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 PCDHGC3Q9UN70 934 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 ANGPTL3Q9Y5C1 460 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 CBX4O00257 560 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 TRAFD1O14545 582 aaPredicted RBP16.53■□□□□ 0.24
LSS-205ENST00000457828 METTL18O95568 372 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 RHOCP08134 193 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 GFAPP14136 432 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 STMN1P16949 149 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 PAX3P23760 479 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 MAP4P27816 1152 aaKnown RBP16.53■□□□□ 0.24
LSS-205ENST00000457828 FAM83EQ2M2I3 478 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 FAM35AQ86V20 835 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 ZDHHC17Q8IUH5 632 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 FBXO27Q8NI29 283 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 DCUN1D1Q96GG9 259 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 OMDQ99983 421 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 SPATA16Q9BXB7 569 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 ADNPQ9H2P0 1102 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 NAV1Q8NEY1 1877 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 A0A0U1RQF3 1178 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 UBA6A0AVT1 1052 aaPredicted RBP16.53■□□□□ 0.24
LSS-205ENST00000457828 PAPSS1O43252 624 aaPredicted RBP16.53■□□□□ 0.24
LSS-205ENST00000457828 NR2C2P49116 596 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 C16orf72Q14CZ0 275 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 NAT14Q8WUY8 206 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 CDK5RAP1Q96SZ6 601 aaKnown RBP16.53■□□□□ 0.24
LSS-205ENST00000457828 TEX264Q9Y6I9 313 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 BCORQ6W2J9 1755 aa16.53■□□□□ 0.24
LSS-205ENST00000457828 TRPC5OSA6NMA1 111 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 PLIN3O60664 434 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 GCAP28676 217 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 INPP5AQ14642 412 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 PTCD3Q96EY7 689 aaKnown RBP16.52■□□□□ 0.24
LSS-205ENST00000457828 OLA1Q9NTK5 396 aaKnown RBP16.52■□□□□ 0.24
LSS-205ENST00000457828 NCKIPSDQ9NZQ3 722 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 COPG2Q9UBF2 871 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 S100BP04271 92 aaPredicted RBP16.52■□□□□ 0.24
LSS-205ENST00000457828 ADARP55265 1226 aaKnown RBP16.52■□□□□ 0.24
LSS-205ENST00000457828 SLC25A11Q02978 314 aaKnown RBP16.52■□□□□ 0.24
LSS-205ENST00000457828 DLG1Q12959 904 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 CA9Q16790 459 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 HECTD3Q5T447 861 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 TAS1R3Q7RTX0 852 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 GPR141Q7Z602 305 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 PCYOX1LQ8NBM8 494 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 PCDH19Q8TAB3 1148 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 ZFRQ96KR1 1074 aaKnown RBP16.52■□□□□ 0.24
LSS-205ENST00000457828 TSPAN18Q96SJ8 248 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 ZNF180Q9UJW8 692 aa16.52■□□□□ 0.24
LSS-205ENST00000457828 DDHD2O94830 711 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 PIK3R1P27986 724 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 RPL14P50914 215 aaKnown RBP16.52■□□□□ 0.23
LSS-205ENST00000457828 ZBTB46Q86UZ6 589 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 ACMSDQ8TDX5 336 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 TBC1D23Q9NUY8 699 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 GALNT8Q9NY28 637 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 RRN3Q9NYV6 651 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 GSTA4O15217 222 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 CSF2RAP15509 400 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 MPSTP25325 297 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 HERC6Q8IVU3 1022 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 DGCR14Q96DF8 476 aaKnown RBP16.52■□□□□ 0.23
LSS-205ENST00000457828 ZNF670Q9BS34 389 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 CINPQ9BW66 212 aaPredicted RBP16.52■□□□□ 0.23
LSS-205ENST00000457828 SLC4A5Q9BY07 1137 aa16.52■□□□□ 0.23
LSS-205ENST00000457828 CHCHD3Q9NX63 227 aaKnown RBP16.52■□□□□ 0.23
LSS-205ENST00000457828 RGSL1A5PLK6 1076 aa16.51■□□□□ 0.23
LSS-205ENST00000457828 VAPBO95292 243 aa16.51■□□□□ 0.23
LSS-205ENST00000457828 GRIA4P48058 902 aa16.51■□□□□ 0.23
LSS-205ENST00000457828 ATXN1P54253 815 aaKnown RBP16.51■□□□□ 0.23
LSS-205ENST00000457828 SLC18A2Q05940 514 aa16.51■□□□□ 0.23
LSS-205ENST00000457828 ZFP1Q6P2D0 407 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms