RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 FIGNQ5HY92 759 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 KIAA1161Q6NSJ0 714 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 LUZP1Q86V48 1076 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 SPATS2Q86XZ4 545 aaKnown RBP15.53■□□□□ 0.08
CHD3-205ENST00000449744 SAP25Q8TEE9 199 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 CASKIN2Q8WXE0 1202 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 ZNF653Q96CK0 615 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 TRIM11Q96F44 468 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 FEM1CQ96JP0 617 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 GDAP1L1Q96MZ0 367 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 AP4E1Q9UPM8 1137 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 SCINQ9Y6U3 715 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 CABIN1Q9Y6J0 2220 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 CEP295Q9C0D2 2601 aa15.53■□□□□ 0.08
CHD3-205ENST00000449744 DDX3XO00571 662 aaKnown RBP eCLIP15.52■□□□□ 0.08
CHD3-205ENST00000449744 NEMP1O14524 444 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 DAPK3O43293 454 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 TMCC1O94876 653 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 LDOC1O95751 146 aaPredicted RBP15.52■□□□□ 0.08
CHD3-205ENST00000449744 IGSF6O95976 241 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 THEGLP0DJG4 465 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 SKILP12757 684 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 GKP32189 559 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 HTR7P34969 479 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 RXRGP48443 463 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 UBASH3AP57075 661 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 RHOAP61586 193 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 RPS21P63220 83 aaKnown RBP15.52■□□□□ 0.08
CHD3-205ENST00000449744 FANCCQ00597 558 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 BNIP3Q12983 259 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 MYLK3Q32MK0 819 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 TDRD12Q587J7 1177 aaKnown RBP15.52■□□□□ 0.08
CHD3-205ENST00000449744 ZNF805Q5CZA5 627 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 E4F1Q66K89 784 aaPredicted RBP15.52■□□□□ 0.08
CHD3-205ENST00000449744 SEL1L3Q68CR1 1132 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 PARS2Q7L3T8 475 aaKnown RBP15.52■□□□□ 0.08
CHD3-205ENST00000449744 DNAAF5Q86Y56 855 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 UMODL1-AS1Q8N2C9 162 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 EID2Q8N6I1 236 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 KDF1Q8NAX2 398 aaPredicted RBP15.52■□□□□ 0.08
CHD3-205ENST00000449744 TMEM145Q8NBT3 493 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 RAB7BQ96AH8 199 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 HMCESQ96FZ2 354 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 CNDP2Q96KP4 475 aaKnown RBP15.52■□□□□ 0.08
CHD3-205ENST00000449744 OSBPL1AQ9BXW6 950 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 TTYH3Q9C0H2 523 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 DHX35Q9H5Z1 703 aaKnown RBP15.52■□□□□ 0.08
CHD3-205ENST00000449744 NOL6Q9H6R4 1146 aaKnown RBP15.52■□□□□ 0.08
CHD3-205ENST00000449744 MRPL47Q9HD33 250 aaKnown RBP15.52■□□□□ 0.08
CHD3-205ENST00000449744 FZD3Q9NPG1 666 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 GPATCH2LQ9NWQ4 482 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 TOR4AQ9NXH8 423 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 MYO1AQ9UBC5 1043 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 PCSK1NQ9UHG2 260 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 ZMIZ1Q9ULJ6 1067 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 ZFR2Q9UPR6 939 aaKnown RBP15.52■□□□□ 0.08
CHD3-205ENST00000449744 FADS3Q9Y5Q0 445 aa15.52■□□□□ 0.08
CHD3-205ENST00000449744 TMEM191CA6NGB0 347 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 C16orf96A6NNT2 1141 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 EIF3CLB5ME19 914 aaKnown RBP15.51■□□□□ 0.07
CHD3-205ENST00000449744 EEF2KO00418 725 aaKnown RBP15.51■□□□□ 0.07
CHD3-205ENST00000449744 ENC1O14682 589 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 AP1G1O43747 822 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 PRPSAP2O60256 369 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 UGT2B4P06133 528 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 MYBL1P10243 752 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 TMEM259Q4ZIN3 620 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 INO80DQ53TQ3 878 aaPredicted RBP15.51■□□□□ 0.07
CHD3-205ENST00000449744 ATXN7L2Q5T6C5 722 aaPredicted RBP15.51■□□□□ 0.07
CHD3-205ENST00000449744 ERMARDQ5T6L9 678 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 GDPD4Q6W3E5 623 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 VPS36Q86VN1 386 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 ZSCAN30Q86W11 494 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 FAM174AQ8TBP5 190 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 FNIP1Q8TF40 1166 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 ZCCHC14Q8WYQ9 949 aaKnown RBP15.51■□□□□ 0.07
CHD3-205ENST00000449744 ARHGEF26Q96DR7 871 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 KLHL32Q96NJ5 620 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 EIF3CQ99613 913 aaKnown RBP15.51■□□□□ 0.07
CHD3-205ENST00000449744 NCAPGQ9BPX3 1015 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.51■□□□□ 0.07
CHD3-205ENST00000449744 CALN1Q9BXU9 219 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 SLC17A9Q9BYT1 436 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 CHD5Q8TDI0 1954 aa15.51■□□□□ 0.07
CHD3-205ENST00000449744 A6NNZ2 444 aa15.5■□□□□ 0.07
CHD3-205ENST00000449744 TSPAN6O43657 245 aa15.5■□□□□ 0.07
CHD3-205ENST00000449744 PAK4O96013 591 aaPredicted RBP15.5■□□□□ 0.07
CHD3-205ENST00000449744 NDST2P52849 883 aa15.5■□□□□ 0.07
CHD3-205ENST00000449744 CLDN2P57739 230 aa15.5■□□□□ 0.07
CHD3-205ENST00000449744 SGCGQ13326 291 aa15.5■□□□□ 0.07
CHD3-205ENST00000449744 SERINC3Q13530 473 aa15.5■□□□□ 0.07
CHD3-205ENST00000449744 CCNI2Q6ZMN8 369 aaPredicted RBP15.5■□□□□ 0.07
CHD3-205ENST00000449744 TMPRSS7Q7RTY8 843 aa15.5■□□□□ 0.07
CHD3-205ENST00000449744 GALNT15Q8N3T1 639 aa15.5■□□□□ 0.07
CHD3-205ENST00000449744 SNRNP25Q9BV90 132 aaKnown RBP15.5■□□□□ 0.07
CHD3-205ENST00000449744 KLC2Q9H0B6 622 aa15.5■□□□□ 0.07
CHD3-205ENST00000449744 UBA2Q9UBT2 640 aaPredicted RBP15.5■□□□□ 0.07
CHD3-205ENST00000449744 RALYQ9UKM9 306 aaKnown RBP15.5■□□□□ 0.07
CHD3-205ENST00000449744 BZW2Q9Y6E2 419 aaKnown RBP15.5■□□□□ 0.07
CHD3-205ENST00000449744 DOCK9Q9BZ29 2069 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms