RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 SLC8A1P32418 973 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 HADHAP40939 763 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 MMP13P45452 471 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 UCNP55089 124 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 TRIP6Q15654 476 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 EFL1Q7Z2Z2 1120 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 KCTD13Q8WZ19 329 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 FCRL2Q96LA5 508 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 SPHK2Q9NRA0 654 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 CACNA1EQ15878 2313 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZNF839A8K0R7 811 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 FOXN3O00409 490 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 CHRNA3P32297 505 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 KCNA1Q09470 495 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 PDCLQ13371 301 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 RBBP7Q16576 425 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 NDUFA9Q16795 377 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 RFWD3Q6PCD5 774 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 FAM180AQ6UWF9 173 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 LRRC49Q8IUZ0 686 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 RFFLQ8WZ73 363 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 SHISA4Q96DD7 197 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 CABS1Q96KC9 395 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 ZBP1Q9H171 429 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 SLC39A1Q9NY26 324 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 KIF17Q9P2E2 1029 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 DYRK1BQ9Y463 629 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 PCDHGB3Q9Y5G1 929 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 CUL9Q8IWT3 2517 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 SPEF2Q9C093 1822 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 DUX1O43812 170 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 CD2BP2O95400 341 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 PLEKP08567 350 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 ATP5DP30049 168 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 MRPS21P82921 87 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 HPCAP84074 193 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 TP53BP2Q13625 1128 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 DHCR24Q15392 516 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 DLG2Q15700 870 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 MRNIPQ6NTE8 343 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 SLC9A9Q8IVB4 645 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 WDR75Q8IWA0 830 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 MFSD6LQ8IWD5 586 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 C12orf29Q8N999 325 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 NAT6Q93015 286 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 C16orf45Q96MC5 204 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 PANX2Q96RD6 677 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 CYP2S1Q96SQ9 504 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 FBXW11Q9UKB1 542 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 PCDHGB4Q9UN71 923 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 MUC6Q6W4X9 2439 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 TNRC6CQ9HCJ0 1690 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 A0A087X0B3 334 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CFLARO15519 480 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 KCNN4O15554 427 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 ADRB2P07550 413 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CES1P23141 567 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 ELK3P41970 407 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 UPP1Q16831 310 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 KLHDC7AQ5VTJ3 777 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 PTRH1Q86Y79 214 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 P3H2Q8IVL5 708 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 GPR65Q8IYL9 337 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 RCOR2Q8IZ40 523 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 HORMAD2Q8N7B1 307 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CARD6Q9BX69 1037 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 RBM12Q9NTZ6 932 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 NKIRAS1Q9NYS0 192 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 MSI1O43347 362 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CYP7B1O75881 506 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 VARSP26640 1264 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CD6P30203 668 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 HOXA9P31269 272 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CDH4P55283 916 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 MXRA7P84157 204 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 DCAF12Q5T6F0 453 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 PPP1R26Q5T8A7 1209 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 RAB43Q86YS6 212 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 SYNPOQ8N3V7 929 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 SMG8Q8ND04 991 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 ICA1LQ8NDH6 482 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 PSMG2Q969U7 264 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 MED8Q96G25 268 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 LMLNQ96KR4 655 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 MBOAT7Q96N66 472 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 POMKQ9H5K3 350 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 VTI1BQ9UEU0 232 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 GGA2Q9UJY4 613 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 DIDO1Q9BTC0 2240 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 QSOX1O00391 747 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 VPS26AO75436 327 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CEBPBP17676 345 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 ATP4AP20648 1035 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CLCN1P35523 988 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 RRADP55042 308 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 YBEYP58557 167 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 TMPRSS15P98073 1019 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 SF1Q15637 639 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 PRRT3Q5FWE3 981 aa5.7□□□□□ -1.5
CDC42BPA-209ENST00000448940 CDCA2Q69YH5 1023 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms